Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF220Q5VTB9 FAM99A-202ENST00000538190 1989 ntBASIC20.77■□□□□ 0.92
RNF220Q5VTB9 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF220Q5VTB9 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.77■□□□□ 0.91
RNF220Q5VTB9 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.91
RNF220Q5VTB9 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RNF220Q5VTB9 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.76■□□□□ 0.91
RNF220Q5VTB9 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.76■□□□□ 0.91
RNF220Q5VTB9 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RNF220Q5VTB9 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF220Q5VTB9 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF220Q5VTB9 AC080038.3-201ENST00000623346 1952 ntBASIC20.76■□□□□ 0.91
RNF220Q5VTB9 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF220Q5VTB9 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF220Q5VTB9 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.76■□□□□ 0.91
RNF220Q5VTB9 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.76■□□□□ 0.91
RNF220Q5VTB9 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF220Q5VTB9 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF220Q5VTB9 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF220Q5VTB9 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.76■□□□□ 0.91
RNF220Q5VTB9 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF220Q5VTB9 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF220Q5VTB9 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF220Q5VTB9 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF220Q5VTB9 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF220Q5VTB9 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF220Q5VTB9 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RNF220Q5VTB9 AC021242.3-201ENST00000607598 1377 ntBASIC20.75■□□□□ 0.91
RNF220Q5VTB9 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF220Q5VTB9 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF220Q5VTB9 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RNF220Q5VTB9 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RNF220Q5VTB9 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF220Q5VTB9 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF220Q5VTB9 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF220Q5VTB9 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RNF220Q5VTB9 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.75■□□□□ 0.91
RNF220Q5VTB9 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
RNF220Q5VTB9 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF220Q5VTB9 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RNF220Q5VTB9 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.74■□□□□ 0.91
RNF220Q5VTB9 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.74■□□□□ 0.91
RNF220Q5VTB9 BX664725.1-201ENST00000438252 379 ntBASIC20.74■□□□□ 0.91
RNF220Q5VTB9 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.74■□□□□ 0.91
RNF220Q5VTB9 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF220Q5VTB9 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF220Q5VTB9 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF220Q5VTB9 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.74■□□□□ 0.91
RNF220Q5VTB9 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.74■□□□□ 0.91
RNF220Q5VTB9 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.74■□□□□ 0.91
RNF220Q5VTB9 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF220Q5VTB9 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF220Q5VTB9 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF220Q5VTB9 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
RNF220Q5VTB9 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.73■□□□□ 0.91
RNF220Q5VTB9 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF220Q5VTB9 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.73■□□□□ 0.91
RNF220Q5VTB9 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF220Q5VTB9 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RNF220Q5VTB9 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.73■□□□□ 0.91
RNF220Q5VTB9 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.73■□□□□ 0.91
RNF220Q5VTB9 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.73■□□□□ 0.91
RNF220Q5VTB9 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
RNF220Q5VTB9 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
RNF220Q5VTB9 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF220Q5VTB9 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF220Q5VTB9 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.73■□□□□ 0.91
RNF220Q5VTB9 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF220Q5VTB9 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF220Q5VTB9 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF220Q5VTB9 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.73■□□□□ 0.91
RNF220Q5VTB9 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.73■□□□□ 0.91
RNF220Q5VTB9 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.73■□□□□ 0.91
RNF220Q5VTB9 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF220Q5VTB9 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF220Q5VTB9 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
RNF220Q5VTB9 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF220Q5VTB9 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF220Q5VTB9 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF220Q5VTB9 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RNF220Q5VTB9 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF220Q5VTB9 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.72■□□□□ 0.91
RNF220Q5VTB9 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.72■□□□□ 0.91
RNF220Q5VTB9 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF220Q5VTB9 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF220Q5VTB9 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RNF220Q5VTB9 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RNF220Q5VTB9 AC079630.1-202ENST00000618127 1840 ntBASIC20.71■□□□□ 0.91
RNF220Q5VTB9 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF220Q5VTB9 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF220Q5VTB9 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.71■□□□□ 0.91
RNF220Q5VTB9 MIR6722-201ENST00000617286 78 ntBASIC20.71■□□□□ 0.91
RNF220Q5VTB9 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.71■□□□□ 0.91
RNF220Q5VTB9 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF220Q5VTB9 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RNF220Q5VTB9 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF220Q5VTB9 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF220Q5VTB9 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF220Q5VTB9 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RNF220Q5VTB9 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms