Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATPAF1Q5TC12 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATPAF1Q5TC12 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATPAF1Q5TC12 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATPAF1Q5TC12 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.73■□□□□ 0.59
ATPAF1Q5TC12 AC080038.3-201ENST00000623346 1952 ntBASIC18.73■□□□□ 0.59
ATPAF1Q5TC12 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
ATPAF1Q5TC12 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATPAF1Q5TC12 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
ATPAF1Q5TC12 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
ATPAF1Q5TC12 AC131281.2-201ENST00000520478 145 ntBASIC18.72■□□□□ 0.59
ATPAF1Q5TC12 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.72■□□□□ 0.59
ATPAF1Q5TC12 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.72■□□□□ 0.59
ATPAF1Q5TC12 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.72■□□□□ 0.59
ATPAF1Q5TC12 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ATPAF1Q5TC12 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATPAF1Q5TC12 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATPAF1Q5TC12 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.72■□□□□ 0.59
ATPAF1Q5TC12 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATPAF1Q5TC12 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.71■□□□□ 0.59
ATPAF1Q5TC12 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ATPAF1Q5TC12 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ATPAF1Q5TC12 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.71■□□□□ 0.59
ATPAF1Q5TC12 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.71■□□□□ 0.59
ATPAF1Q5TC12 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
ATPAF1Q5TC12 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.71■□□□□ 0.59
ATPAF1Q5TC12 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.71■□□□□ 0.59
ATPAF1Q5TC12 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ATPAF1Q5TC12 MIR4466-201ENST00000606121 54 ntBASIC18.71■□□□□ 0.59
ATPAF1Q5TC12 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.71■□□□□ 0.59
ATPAF1Q5TC12 AC241377.3-202ENST00000626088 1088 ntBASIC18.71■□□□□ 0.59
ATPAF1Q5TC12 AC241585.3-202ENST00000628937 1088 ntBASIC18.71■□□□□ 0.59
ATPAF1Q5TC12 AC245100.8-202ENST00000629247 1058 ntBASIC18.71■□□□□ 0.59
ATPAF1Q5TC12 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATPAF1Q5TC12 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
ATPAF1Q5TC12 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.71■□□□□ 0.59
ATPAF1Q5TC12 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATPAF1Q5TC12 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATPAF1Q5TC12 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.7■□□□□ 0.58
ATPAF1Q5TC12 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATPAF1Q5TC12 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATPAF1Q5TC12 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATPAF1Q5TC12 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.7■□□□□ 0.58
ATPAF1Q5TC12 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATPAF1Q5TC12 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.7■□□□□ 0.58
ATPAF1Q5TC12 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.7■□□□□ 0.58
ATPAF1Q5TC12 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
ATPAF1Q5TC12 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATPAF1Q5TC12 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
ATPAF1Q5TC12 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATPAF1Q5TC12 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.7■□□□□ 0.58
ATPAF1Q5TC12 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATPAF1Q5TC12 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.7■□□□□ 0.58
ATPAF1Q5TC12 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
ATPAF1Q5TC12 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
ATPAF1Q5TC12 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.7■□□□□ 0.58
ATPAF1Q5TC12 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATPAF1Q5TC12 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATPAF1Q5TC12 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
ATPAF1Q5TC12 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATPAF1Q5TC12 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ATPAF1Q5TC12 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATPAF1Q5TC12 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATPAF1Q5TC12 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATPAF1Q5TC12 LINC01529-204ENST00000636474 1715 ntBASIC18.69■□□□□ 0.58
ATPAF1Q5TC12 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATPAF1Q5TC12 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATPAF1Q5TC12 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ATPAF1Q5TC12 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATPAF1Q5TC12 SRD5A1P1-201ENST00000442297 786 ntBASIC18.69■□□□□ 0.58
ATPAF1Q5TC12 DUX4L4-201ENST00000566884 1269 ntBASIC18.69■□□□□ 0.58
ATPAF1Q5TC12 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATPAF1Q5TC12 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATPAF1Q5TC12 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
ATPAF1Q5TC12 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.69■□□□□ 0.58
ATPAF1Q5TC12 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATPAF1Q5TC12 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATPAF1Q5TC12 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATPAF1Q5TC12 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATPAF1Q5TC12 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
ATPAF1Q5TC12 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATPAF1Q5TC12 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATPAF1Q5TC12 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATPAF1Q5TC12 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATPAF1Q5TC12 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATPAF1Q5TC12 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATPAF1Q5TC12 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
ATPAF1Q5TC12 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.67■□□□□ 0.58
ATPAF1Q5TC12 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.67■□□□□ 0.58
ATPAF1Q5TC12 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATPAF1Q5TC12 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
ATPAF1Q5TC12 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATPAF1Q5TC12 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.67■□□□□ 0.58
ATPAF1Q5TC12 AC092171.4-201ENST00000609130 632 ntBASIC18.67■□□□□ 0.58
ATPAF1Q5TC12 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.67■□□□□ 0.58
ATPAF1Q5TC12 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.67■□□□□ 0.58
ATPAF1Q5TC12 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
ATPAF1Q5TC12 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATPAF1Q5TC12 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATPAF1Q5TC12 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms