Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SHROOM1Q2M3G4 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SHROOM1Q2M3G4 AC093323.1-202ENST00000635031 2045 ntBASIC25.5■■□□□ 1.67
SHROOM1Q2M3G4 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.5■■□□□ 1.67
SHROOM1Q2M3G4 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SHROOM1Q2M3G4 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC25.49■■□□□ 1.67
SHROOM1Q2M3G4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SHROOM1Q2M3G4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SHROOM1Q2M3G4 TESC-206ENST00000541210 936 ntTSL 3 BASIC25.49■■□□□ 1.67
SHROOM1Q2M3G4 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC25.49■■□□□ 1.67
SHROOM1Q2M3G4 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SHROOM1Q2M3G4 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC25.49■■□□□ 1.67
SHROOM1Q2M3G4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
SHROOM1Q2M3G4 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SHROOM1Q2M3G4 CROCCP5-201ENST00000436658 830 ntBASIC25.48■■□□□ 1.67
SHROOM1Q2M3G4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC25.48■■□□□ 1.67
SHROOM1Q2M3G4 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
SHROOM1Q2M3G4 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
SHROOM1Q2M3G4 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC25.48■■□□□ 1.67
SHROOM1Q2M3G4 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SHROOM1Q2M3G4 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC25.48■■□□□ 1.67
SHROOM1Q2M3G4 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
SHROOM1Q2M3G4 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC25.48■■□□□ 1.67
SHROOM1Q2M3G4 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
SHROOM1Q2M3G4 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SHROOM1Q2M3G4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SHROOM1Q2M3G4 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
SHROOM1Q2M3G4 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC25.47■■□□□ 1.67
SHROOM1Q2M3G4 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SHROOM1Q2M3G4 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SHROOM1Q2M3G4 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC25.46■■□□□ 1.67
SHROOM1Q2M3G4 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC25.46■■□□□ 1.67
SHROOM1Q2M3G4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SHROOM1Q2M3G4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SHROOM1Q2M3G4 KRT19P1-201ENST00000405746 1186 ntBASIC25.46■■□□□ 1.67
SHROOM1Q2M3G4 MAP2K4P1-201ENST00000438453 1195 ntBASIC25.46■■□□□ 1.67
SHROOM1Q2M3G4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SHROOM1Q2M3G4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC25.46■■□□□ 1.67
SHROOM1Q2M3G4 AC104187.1-201ENST00000607510 612 ntBASIC25.46■■□□□ 1.67
SHROOM1Q2M3G4 BID-214ENST00000617586 542 ntTSL 5 BASIC25.46■■□□□ 1.67
SHROOM1Q2M3G4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC25.46■■□□□ 1.67
SHROOM1Q2M3G4 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC25.46■■□□□ 1.67
SHROOM1Q2M3G4 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.67
SHROOM1Q2M3G4 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.67
SHROOM1Q2M3G4 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.67
SHROOM1Q2M3G4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
SHROOM1Q2M3G4 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SHROOM1Q2M3G4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC25.45■■□□□ 1.66
SHROOM1Q2M3G4 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SHROOM1Q2M3G4 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SHROOM1Q2M3G4 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC25.44■■□□□ 1.66
SHROOM1Q2M3G4 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SHROOM1Q2M3G4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SHROOM1Q2M3G4 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SHROOM1Q2M3G4 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SHROOM1Q2M3G4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
SHROOM1Q2M3G4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SHROOM1Q2M3G4 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
SHROOM1Q2M3G4 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SHROOM1Q2M3G4 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SHROOM1Q2M3G4 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SHROOM1Q2M3G4 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC25.43■■□□□ 1.66
SHROOM1Q2M3G4 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
SHROOM1Q2M3G4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SHROOM1Q2M3G4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SHROOM1Q2M3G4 PPP1R14BP3-201ENST00000509033 445 ntBASIC25.43■■□□□ 1.66
SHROOM1Q2M3G4 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
SHROOM1Q2M3G4 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
SHROOM1Q2M3G4 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC25.43■■□□□ 1.66
SHROOM1Q2M3G4 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC25.43■■□□□ 1.66
SHROOM1Q2M3G4 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SHROOM1Q2M3G4 GAS2L1P2-201ENST00000436355 1356 ntBASIC25.43■■□□□ 1.66
SHROOM1Q2M3G4 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC25.43■■□□□ 1.66
SHROOM1Q2M3G4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SHROOM1Q2M3G4 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SHROOM1Q2M3G4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC25.42■■□□□ 1.66
SHROOM1Q2M3G4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC25.42■■□□□ 1.66
SHROOM1Q2M3G4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC25.42■■□□□ 1.66
SHROOM1Q2M3G4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC25.42■■□□□ 1.66
SHROOM1Q2M3G4 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
SHROOM1Q2M3G4 AC026185.1-201ENST00000445748 174 ntBASIC25.42■■□□□ 1.66
SHROOM1Q2M3G4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC25.42■■□□□ 1.66
SHROOM1Q2M3G4 MFSD11-216ENST00000590393 1141 ntBASIC25.42■■□□□ 1.66
SHROOM1Q2M3G4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SHROOM1Q2M3G4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SHROOM1Q2M3G4 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SHROOM1Q2M3G4 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SHROOM1Q2M3G4 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SHROOM1Q2M3G4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SHROOM1Q2M3G4 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC25.41■■□□□ 1.66
SHROOM1Q2M3G4 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC25.41■■□□□ 1.66
SHROOM1Q2M3G4 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SHROOM1Q2M3G4 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SHROOM1Q2M3G4 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC25.41■■□□□ 1.66
SHROOM1Q2M3G4 AC055733.4-201ENST00000638462 1354 ntBASIC25.41■■□□□ 1.66
SHROOM1Q2M3G4 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
SHROOM1Q2M3G4 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
SHROOM1Q2M3G4 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SHROOM1Q2M3G4 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
SHROOM1Q2M3G4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC25.4■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms