Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VSX2P58304 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VSX2P58304 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.74■□□□□ 0.91
VSX2P58304 AC087742.1-201ENST00000575880 1738 ntBASIC20.74■□□□□ 0.91
VSX2P58304 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.74■□□□□ 0.91
VSX2P58304 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
VSX2P58304 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.74■□□□□ 0.91
VSX2P58304 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VSX2P58304 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.74■□□□□ 0.91
VSX2P58304 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.73■□□□□ 0.91
VSX2P58304 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VSX2P58304 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
VSX2P58304 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.73■□□□□ 0.91
VSX2P58304 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.73■□□□□ 0.91
VSX2P58304 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.73■□□□□ 0.91
VSX2P58304 SMUG1P1-201ENST00000590640 811 ntBASIC20.73■□□□□ 0.91
VSX2P58304 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VSX2P58304 MIR6821-201ENST00000617625 74 ntBASIC20.73■□□□□ 0.91
VSX2P58304 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VSX2P58304 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VSX2P58304 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
VSX2P58304 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VSX2P58304 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VSX2P58304 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VSX2P58304 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.72■□□□□ 0.91
VSX2P58304 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VSX2P58304 AC027612.3-201ENST00000413684 1047 ntBASIC20.72■□□□□ 0.91
VSX2P58304 AC097381.1-201ENST00000429019 1296 ntBASIC20.72■□□□□ 0.91
VSX2P58304 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.72■□□□□ 0.91
VSX2P58304 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VSX2P58304 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VSX2P58304 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VSX2P58304 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
VSX2P58304 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
VSX2P58304 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VSX2P58304 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VSX2P58304 YBX1P1-201ENST00000445822 960 ntBASIC20.71■□□□□ 0.91
VSX2P58304 AC079089.2-201ENST00000531211 1277 ntBASIC20.71■□□□□ 0.91
VSX2P58304 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.71■□□□□ 0.91
VSX2P58304 AC087623.3-201ENST00000607047 1098 ntBASIC20.71■□□□□ 0.91
VSX2P58304 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
VSX2P58304 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VSX2P58304 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
VSX2P58304 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
VSX2P58304 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
VSX2P58304 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.7■□□□□ 0.9
VSX2P58304 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.7■□□□□ 0.9
VSX2P58304 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.7■□□□□ 0.9
VSX2P58304 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.7■□□□□ 0.9
VSX2P58304 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VSX2P58304 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
VSX2P58304 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
VSX2P58304 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VSX2P58304 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VSX2P58304 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.69■□□□□ 0.9
VSX2P58304 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VSX2P58304 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VSX2P58304 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VSX2P58304 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.69■□□□□ 0.9
VSX2P58304 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
VSX2P58304 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.69■□□□□ 0.9
VSX2P58304 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VSX2P58304 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.68■□□□□ 0.9
VSX2P58304 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
VSX2P58304 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VSX2P58304 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
VSX2P58304 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VSX2P58304 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
VSX2P58304 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.68■□□□□ 0.9
VSX2P58304 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VSX2P58304 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.68■□□□□ 0.9
VSX2P58304 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.68■□□□□ 0.9
VSX2P58304 MIR5787-201ENST00000611784 55 ntBASIC20.68■□□□□ 0.9
VSX2P58304 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VSX2P58304 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.68■□□□□ 0.9
VSX2P58304 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
VSX2P58304 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
VSX2P58304 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.68■□□□□ 0.9
VSX2P58304 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VSX2P58304 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
VSX2P58304 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
VSX2P58304 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
VSX2P58304 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
VSX2P58304 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.67■□□□□ 0.9
VSX2P58304 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.67■□□□□ 0.9
VSX2P58304 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
VSX2P58304 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VSX2P58304 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VSX2P58304 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
VSX2P58304 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VSX2P58304 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
VSX2P58304 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VSX2P58304 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VSX2P58304 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VSX2P58304 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VSX2P58304 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VSX2P58304 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
VSX2P58304 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VSX2P58304 AC123595.1-201ENST00000440769 1046 ntBASIC20.66■□□□□ 0.9
VSX2P58304 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms