Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN12P56749 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN12P56749 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN12P56749 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN12P56749 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN12P56749 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN12P56749 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN12P56749 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.8■□□□□ 0.6
CLDN12P56749 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN12P56749 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN12P56749 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CLDN12P56749 AC004987.1-201ENST00000428627 508 ntBASIC18.8■□□□□ 0.6
CLDN12P56749 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.8■□□□□ 0.6
CLDN12P56749 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN12P56749 AC074183.2-201ENST00000623112 922 ntBASIC18.8■□□□□ 0.6
CLDN12P56749 AC004687.1-201ENST00000579003 1625 ntBASIC18.8■□□□□ 0.6
CLDN12P56749 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN12P56749 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN12P56749 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN12P56749 AL157384.1-201ENST00000445995 2473 ntBASIC18.8■□□□□ 0.6
CLDN12P56749 Z98882.1-201ENST00000622160 2253 ntBASIC18.8■□□□□ 0.6
CLDN12P56749 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CLDN12P56749 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN12P56749 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.79■□□□□ 0.6
CLDN12P56749 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.79■□□□□ 0.6
CLDN12P56749 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN12P56749 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.79■□□□□ 0.6
CLDN12P56749 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN12P56749 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN12P56749 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CLDN12P56749 NTF6A-201ENST00000591175 560 ntBASIC18.79■□□□□ 0.6
CLDN12P56749 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.79■□□□□ 0.6
CLDN12P56749 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.79■□□□□ 0.6
CLDN12P56749 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CLDN12P56749 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN12P56749 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN12P56749 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN12P56749 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN12P56749 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.79■□□□□ 0.6
CLDN12P56749 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN12P56749 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN12P56749 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN12P56749 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN12P56749 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.78■□□□□ 0.6
CLDN12P56749 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN12P56749 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN12P56749 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
CLDN12P56749 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.78■□□□□ 0.6
CLDN12P56749 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.78■□□□□ 0.6
CLDN12P56749 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.78■□□□□ 0.6
CLDN12P56749 ATP5G2P3-201ENST00000429083 425 ntBASIC18.78■□□□□ 0.6
CLDN12P56749 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.78■□□□□ 0.6
CLDN12P56749 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
CLDN12P56749 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN12P56749 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
CLDN12P56749 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.78■□□□□ 0.6
CLDN12P56749 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN12P56749 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN12P56749 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
CLDN12P56749 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
CLDN12P56749 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN12P56749 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CLDN12P56749 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CLDN12P56749 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN12P56749 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.77■□□□□ 0.6
CLDN12P56749 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN12P56749 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.77■□□□□ 0.6
CLDN12P56749 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CLDN12P56749 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN12P56749 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.77■□□□□ 0.6
CLDN12P56749 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.77■□□□□ 0.6
CLDN12P56749 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN12P56749 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN12P56749 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN12P56749 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
CLDN12P56749 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.77■□□□□ 0.59
CLDN12P56749 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CLDN12P56749 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN12P56749 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.76■□□□□ 0.59
CLDN12P56749 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.76■□□□□ 0.59
CLDN12P56749 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN12P56749 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN12P56749 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN12P56749 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN12P56749 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.76■□□□□ 0.59
CLDN12P56749 DUX4L4-201ENST00000566884 1269 ntBASIC18.76■□□□□ 0.59
CLDN12P56749 ABHD17AP5-201ENST00000580133 923 ntBASIC18.76■□□□□ 0.59
CLDN12P56749 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN12P56749 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN12P56749 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN12P56749 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN12P56749 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.76■□□□□ 0.59
CLDN12P56749 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN12P56749 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN12P56749 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN12P56749 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN12P56749 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN12P56749 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN12P56749 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.75■□□□□ 0.59
CLDN12P56749 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms