Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLDN8P56748 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.63■□□□□ 0.89
CLDN8P56748 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLDN8P56748 AL035685.1-201ENST00000636663 812 ntBASIC20.63■□□□□ 0.89
CLDN8P56748 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.63■□□□□ 0.89
CLDN8P56748 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLDN8P56748 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLDN8P56748 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CLDN8P56748 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN8P56748 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CLDN8P56748 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.62■□□□□ 0.89
CLDN8P56748 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN8P56748 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN8P56748 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN8P56748 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN8P56748 MIR3621-201ENST00000580529 85 ntBASIC20.62■□□□□ 0.89
CLDN8P56748 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CLDN8P56748 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN8P56748 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN8P56748 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.62■□□□□ 0.89
CLDN8P56748 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN8P56748 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.62■□□□□ 0.89
CLDN8P56748 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN8P56748 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN8P56748 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.61■□□□□ 0.89
CLDN8P56748 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN8P56748 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.61■□□□□ 0.89
CLDN8P56748 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN8P56748 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN8P56748 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.61■□□□□ 0.89
CLDN8P56748 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.61■□□□□ 0.89
CLDN8P56748 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.61■□□□□ 0.89
CLDN8P56748 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.61■□□□□ 0.89
CLDN8P56748 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.61■□□□□ 0.89
CLDN8P56748 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN8P56748 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.61■□□□□ 0.89
CLDN8P56748 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN8P56748 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.61■□□□□ 0.89
CLDN8P56748 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.6■□□□□ 0.89
CLDN8P56748 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.6■□□□□ 0.89
CLDN8P56748 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN8P56748 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN8P56748 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
CLDN8P56748 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN8P56748 GUSBP5-201ENST00000418136 578 ntBASIC20.6■□□□□ 0.89
CLDN8P56748 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.6■□□□□ 0.89
CLDN8P56748 AC068587.7-201ENST00000641602 218 ntBASIC20.6■□□□□ 0.89
CLDN8P56748 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN8P56748 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
CLDN8P56748 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN8P56748 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.6■□□□□ 0.89
CLDN8P56748 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN8P56748 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN8P56748 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
CLDN8P56748 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN8P56748 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN8P56748 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN8P56748 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN8P56748 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN8P56748 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN8P56748 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.59■□□□□ 0.89
CLDN8P56748 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.59■□□□□ 0.89
CLDN8P56748 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN8P56748 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN8P56748 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN8P56748 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN8P56748 MIR3181-201ENST00000578512 73 ntBASIC20.59■□□□□ 0.89
CLDN8P56748 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.59■□□□□ 0.89
CLDN8P56748 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN8P56748 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CLDN8P56748 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN8P56748 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.59■□□□□ 0.89
CLDN8P56748 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN8P56748 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CLDN8P56748 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.58■□□□□ 0.89
CLDN8P56748 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CLDN8P56748 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CLDN8P56748 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLDN8P56748 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLDN8P56748 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLDN8P56748 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLDN8P56748 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CLDN8P56748 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CLDN8P56748 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.58■□□□□ 0.89
CLDN8P56748 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.58■□□□□ 0.89
CLDN8P56748 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.58■□□□□ 0.89
CLDN8P56748 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.58■□□□□ 0.89
CLDN8P56748 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLDN8P56748 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.58■□□□□ 0.88
CLDN8P56748 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLDN8P56748 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLDN8P56748 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLDN8P56748 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLDN8P56748 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN8P56748 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.57■□□□□ 0.88
CLDN8P56748 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.57■□□□□ 0.88
CLDN8P56748 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.57■□□□□ 0.88
CLDN8P56748 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN8P56748 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.57■□□□□ 0.88
CLDN8P56748 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms