Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CMC4P56277 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC16.14■□□□□ 0.17
CMC4P56277 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CMC4P56277 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC16.14■□□□□ 0.17
CMC4P56277 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CMC4P56277 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CMC4P56277 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC16.14■□□□□ 0.17
CMC4P56277 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC16.13■□□□□ 0.17
CMC4P56277 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CMC4P56277 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CMC4P56277 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC16.13■□□□□ 0.17
CMC4P56277 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CMC4P56277 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC16.13■□□□□ 0.17
CMC4P56277 LGR4-203ENST00000480977 492 ntTSL 2 BASIC16.13■□□□□ 0.17
CMC4P56277 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CMC4P56277 AC012414.1-201ENST00000556676 535 ntBASIC16.13■□□□□ 0.17
CMC4P56277 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC16.13■□□□□ 0.17
CMC4P56277 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC16.13■□□□□ 0.17
CMC4P56277 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CMC4P56277 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CMC4P56277 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CMC4P56277 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CMC4P56277 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CMC4P56277 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CMC4P56277 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CMC4P56277 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CMC4P56277 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CMC4P56277 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC16.12■□□□□ 0.17
CMC4P56277 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CMC4P56277 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CMC4P56277 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CMC4P56277 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC16.12■□□□□ 0.17
CMC4P56277 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CMC4P56277 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
CMC4P56277 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CMC4P56277 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC16.12■□□□□ 0.17
CMC4P56277 STOX2-205ENST00000513034 807 ntTSL 3 BASIC16.12■□□□□ 0.17
CMC4P56277 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CMC4P56277 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CMC4P56277 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CMC4P56277 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
CMC4P56277 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CMC4P56277 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC16.12■□□□□ 0.17
CMC4P56277 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CMC4P56277 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CMC4P56277 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CMC4P56277 AC009237.3-201ENST00000393279 1427 ntBASIC16.11■□□□□ 0.17
CMC4P56277 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC16.11■□□□□ 0.17
CMC4P56277 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC16.11■□□□□ 0.17
CMC4P56277 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
CMC4P56277 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CMC4P56277 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CMC4P56277 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CMC4P56277 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
CMC4P56277 GUK1-205ENST00000366722 850 ntTSL 3 BASIC16.11■□□□□ 0.17
CMC4P56277 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
CMC4P56277 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CMC4P56277 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CMC4P56277 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CMC4P56277 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CMC4P56277 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CMC4P56277 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC16.11■□□□□ 0.17
CMC4P56277 AC087742.1-201ENST00000575880 1738 ntBASIC16.11■□□□□ 0.17
CMC4P56277 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CMC4P56277 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CMC4P56277 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC16.1■□□□□ 0.17
CMC4P56277 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CMC4P56277 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CMC4P56277 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC16.1■□□□□ 0.17
CMC4P56277 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CMC4P56277 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CMC4P56277 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CMC4P56277 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CMC4P56277 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC16.1■□□□□ 0.17
CMC4P56277 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CMC4P56277 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CMC4P56277 BX005040.4-201ENST00000637145 1518 ntBASIC16.09■□□□□ 0.17
CMC4P56277 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CMC4P56277 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CMC4P56277 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CMC4P56277 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CMC4P56277 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CMC4P56277 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC16.09■□□□□ 0.17
CMC4P56277 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CMC4P56277 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC16.09■□□□□ 0.17
CMC4P56277 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CMC4P56277 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC16.09■□□□□ 0.17
CMC4P56277 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC16.09■□□□□ 0.17
CMC4P56277 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CMC4P56277 SMUG1P1-201ENST00000590640 811 ntBASIC16.09■□□□□ 0.17
CMC4P56277 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC16.09■□□□□ 0.17
CMC4P56277 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CMC4P56277 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CMC4P56277 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC16.09■□□□□ 0.17
CMC4P56277 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CMC4P56277 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CMC4P56277 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CMC4P56277 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CMC4P56277 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CMC4P56277 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms