Protein–RNA interactions for Protein: P54000

SUB1, RNA polymerase II transcriptional coactivator SUB1, yeastyeast

Known RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SUB1P54000 SPT2YER161C 1002 nt4.49□□□□□ -1.69
SUB1P54000 TYS1YGR185C 1185 nt4.49□□□□□ -1.69
SUB1P54000 PCD1YLR151C 1023 nt4.49□□□□□ -1.69
SUB1P54000 INN1YNL152W 1230 nt4.49□□□□□ -1.69
SUB1P54000 IRC14YOR135C 342 nt4.49□□□□□ -1.69
SUB1P54000 DGA1YOR245C 1257 nt4.49□□□□□ -1.69
SUB1P54000 SCD6YPR129W 1050 nt4.49□□□□□ -1.69
SUB1P54000 CPA2YJR109C 3357 nt4.49□□□□□ -1.69
SUB1P54000 ALG6YOR002W 1635 nt4.49□□□□□ -1.69
SUB1P54000 CET1YPL228W 1650 nt4.48□□□□□ -1.69
SUB1P54000 MIP6YHR015W 1980 nt4.48□□□□□ -1.69
SUB1P54000 YDL172CYDL172C 480 nt4.48□□□□□ -1.69
SUB1P54000 GCD14YJL125C 1152 nt4.48□□□□□ -1.69
SUB1P54000 SAP30YMR263W 606 nt4.48□□□□□ -1.69
SUB1P54000 YNL217WYNL217W 981 nt4.48□□□□□ -1.69
SUB1P54000 RSC30YHR056C 2652 nt4.48□□□□□ -1.69
SUB1P54000 UTP6YDR449C 1323 nt4.47□□□□□ -1.69
SUB1P54000 RAD52YML032C 1416 nt4.47□□□□□ -1.69
SUB1P54000 YDL199CYDL199C 2064 nt4.47□□□□□ -1.69
SUB1P54000 MSM1YGR171C 1728 nt4.47□□□□□ -1.69
SUB1P54000 MGT1YDL200C 567 nt4.47□□□□□ -1.69
SUB1P54000 LSB1YGR136W 726 nt4.47□□□□□ -1.69
SUB1P54000 IES3YLR052W 753 nt4.47□□□□□ -1.69
SUB1P54000 YLR412C-AYLR412C-A 207 nt4.47□□□□□ -1.69
SUB1P54000 YML047W-AYML047W-A 366 nt4.47□□□□□ -1.69
SUB1P54000 OCA2YNL056W 594 nt4.47□□□□□ -1.69
SUB1P54000 PIN3YPR154W 648 nt4.47□□□□□ -1.69
SUB1P54000 RPS9BYBR189W 588 nt4.47□□□□□ -1.69
SUB1P54000 MRPL27YBR282W 441 nt4.47□□□□□ -1.69
SUB1P54000 STE24YJR117W 1362 nt4.47□□□□□ -1.69
SUB1P54000 PRP9YDL030W 1593 nt4.47□□□□□ -1.69
SUB1P54000 TMA108YIL137C 2841 nt4.47□□□□□ -1.69
SUB1P54000 YCF1YDR135C 4548 nt4.47□□□□□ -1.69
SUB1P54000 MON1YGL124C 1935 nt4.46□□□□□ -1.69
SUB1P54000 ECM22YLR228C 2445 nt4.46□□□□□ -1.69
SUB1P54000 THI13YDL244W 1023 nt4.46□□□□□ -1.7
SUB1P54000 BNA6YFR047C 888 nt4.46□□□□□ -1.7
SUB1P54000 YGL006W-AYGL006W-A 111 nt4.46□□□□□ -1.7
SUB1P54000 CFD1YIL003W 882 nt4.46□□□□□ -1.7
SUB1P54000 YIL156W-AYIL156W-A 402 nt4.46□□□□□ -1.7
SUB1P54000 THI11YJR156C 1023 nt4.46□□□□□ -1.7
SUB1P54000 POP8YBL018C 402 nt4.46□□□□□ -1.7
SUB1P54000 ELA1YNL230C 1140 nt4.46□□□□□ -1.7
SUB1P54000 DSS1YMR287C 2910 nt4.45□□□□□ -1.7
SUB1P54000 MAL12YGR292W 1755 nt4.45□□□□□ -1.7
SUB1P54000 MAL32YBR299W 1755 nt4.45□□□□□ -1.7
SUB1P54000 CLB3YDL155W 1284 nt4.45□□□□□ -1.7
SUB1P54000 DET1YDR051C 1005 nt4.45□□□□□ -1.7
SUB1P54000 RPL1BYGL135W 654 nt4.45□□□□□ -1.7
SUB1P54000 YGR190CYGR190C 366 nt4.45□□□□□ -1.7
SUB1P54000 DOG1YHR044C 741 nt4.45□□□□□ -1.7
SUB1P54000 EPT1YHR123W 1176 nt4.45□□□□□ -1.7
SUB1P54000 PSY3YLR376C 729 nt4.45□□□□□ -1.7
SUB1P54000 EAF7YNL136W 1278 nt4.45□□□□□ -1.7
SUB1P54000 PEX11YOL147C 711 nt4.45□□□□□ -1.7
SUB1P54000 YOL166CYOL166C 339 nt4.45□□□□□ -1.7
SUB1P54000 ATG5YPL149W 885 nt4.45□□□□□ -1.7
SUB1P54000 RPL1AYPL220W 654 nt4.45□□□□□ -1.7
SUB1P54000 RIA1YNL163C 3333 nt4.45□□□□□ -1.7
SUB1P54000 KAR5YMR065W 1515 nt4.45□□□□□ -1.7
SUB1P54000 YGL140CYGL140C 3660 nt4.45□□□□□ -1.7
SUB1P54000 ETP1YHL010C 1758 nt4.45□□□□□ -1.7
SUB1P54000 GSC2YGR032W 5688 nt4.45□□□□□ -1.7
SUB1P54000 EMP47YFL048C 1338 nt4.45□□□□□ -1.7
SUB1P54000 RDS2YPL133C 1341 nt4.45□□□□□ -1.7
SUB1P54000 TUB2YFL037W 1374 nt4.44□□□□□ -1.7
SUB1P54000 SWI3YJL176C 2478 nt4.44□□□□□ -1.7
SUB1P54000 SOL4YGR248W 768 nt4.44□□□□□ -1.7
SUB1P54000 tS(AGA)D3tS(AGA)D3 83 nt4.44□□□□□ -1.7
SUB1P54000 RSM26YJR101W 801 nt4.44□□□□□ -1.7
SUB1P54000 SIC1YLR079W 855 nt4.44□□□□□ -1.7
SUB1P54000 NMA1YLR328W 1206 nt4.44□□□□□ -1.7
SUB1P54000 RDN58-1RDN58-1 158 nt4.44□□□□□ -1.7
SUB1P54000 RDN58-2RDN58-2 158 nt4.44□□□□□ -1.7
SUB1P54000 YOR200WYOR200W 399 nt4.44□□□□□ -1.7
SUB1P54000 RRP36YOR287C 903 nt4.44□□□□□ -1.7
SUB1P54000 FRE4YNR060W 2160 nt4.44□□□□□ -1.7
SUB1P54000 VIP1YLR410W 3441 nt4.44□□□□□ -1.7
SUB1P54000 YHR202WYHR202W 1809 nt4.44□□□□□ -1.7
SUB1P54000 ATP25YMR098C 1839 nt4.44□□□□□ -1.7
SUB1P54000 VPS73YGL104C 1461 nt4.43□□□□□ -1.7
SUB1P54000 ERG5YMR015C 1617 nt4.43□□□□□ -1.7
SUB1P54000 YDR336WYDR336W 945 nt4.43□□□□□ -1.7
SUB1P54000 PMI40YER003C 1290 nt4.43□□□□□ -1.7
SUB1P54000 GPP2YER062C 753 nt4.43□□□□□ -1.7
SUB1P54000 TAN1YGL232W 870 nt4.43□□□□□ -1.7
SUB1P54000 PCL7YIL050W 858 nt4.43□□□□□ -1.7
SUB1P54000 MRP8YKL142W 660 nt4.43□□□□□ -1.7
SUB1P54000 YLR416CYLR416C 399 nt4.43□□□□□ -1.7
SUB1P54000 TRM112YNR046W 408 nt4.43□□□□□ -1.7
SUB1P54000 SUT2YPR009W 807 nt4.43□□□□□ -1.7
SUB1P54000 MRPS9YBR146W 837 nt4.43□□□□□ -1.7
SUB1P54000 PBN1YCL052C 1251 nt4.43□□□□□ -1.7
SUB1P54000 EBS1YDR206W 2655 nt4.43□□□□□ -1.7
SUB1P54000 SSH1YBR283C 1473 nt4.43□□□□□ -1.7
SUB1P54000 ECM18YDR125C 1362 nt4.42□□□□□ -1.7
SUB1P54000 YMR221CYMR221C 1515 nt4.42□□□□□ -1.7
SUB1P54000 KAP95YLR347C 2586 nt4.42□□□□□ -1.7
SUB1P54000 NHP10YDL002C 612 nt4.42□□□□□ -1.7
SUB1P54000 BUD16YEL029C 939 nt4.42□□□□□ -1.7
Retrieved 100 of 7,029 protein–RNA pairs in 19.4 ms