Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.87■■□□□ 1.09
LIMK2P53671 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LIMK2P53671 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LIMK2P53671 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
LIMK2P53671 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LIMK2P53671 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
LIMK2P53671 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LIMK2P53671 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LIMK2P53671 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LIMK2P53671 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LIMK2P53671 AC105265.2-201ENST00000467189 838 ntBASIC21.86■■□□□ 1.09
LIMK2P53671 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.86■■□□□ 1.09
LIMK2P53671 RARRES2P6-201ENST00000567333 442 ntBASIC21.86■■□□□ 1.09
LIMK2P53671 AC011298.3-201ENST00000615796 283 ntBASIC21.86■■□□□ 1.09
LIMK2P53671 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.86■■□□□ 1.09
LIMK2P53671 AC241377.3-202ENST00000626088 1088 ntBASIC21.86■■□□□ 1.09
LIMK2P53671 AC241585.3-202ENST00000628937 1088 ntBASIC21.86■■□□□ 1.09
LIMK2P53671 AC245100.8-202ENST00000629247 1058 ntBASIC21.86■■□□□ 1.09
LIMK2P53671 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.86■■□□□ 1.09
LIMK2P53671 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
LIMK2P53671 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LIMK2P53671 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LIMK2P53671 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LIMK2P53671 AC091305.1-201ENST00000479476 895 ntBASIC21.85■■□□□ 1.09
LIMK2P53671 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.85■■□□□ 1.09
LIMK2P53671 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
LIMK2P53671 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
LIMK2P53671 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.85■■□□□ 1.09
LIMK2P53671 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LIMK2P53671 FBXW4P1-201ENST00000426721 2239 ntBASIC21.84■■□□□ 1.09
LIMK2P53671 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LIMK2P53671 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.84■■□□□ 1.09
LIMK2P53671 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.84■■□□□ 1.09
LIMK2P53671 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LIMK2P53671 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
LIMK2P53671 CA15P2-201ENST00000611168 834 ntBASIC21.84■■□□□ 1.09
LIMK2P53671 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LIMK2P53671 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.84■■□□□ 1.09
LIMK2P53671 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
LIMK2P53671 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
LIMK2P53671 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
LIMK2P53671 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LIMK2P53671 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.84■■□□□ 1.09
LIMK2P53671 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
LIMK2P53671 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.83■■□□□ 1.09
LIMK2P53671 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.83■■□□□ 1.09
LIMK2P53671 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.83■■□□□ 1.09
LIMK2P53671 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.83■■□□□ 1.09
LIMK2P53671 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.83■■□□□ 1.09
LIMK2P53671 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.83■■□□□ 1.09
LIMK2P53671 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.83■■□□□ 1.09
LIMK2P53671 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.83■■□□□ 1.09
LIMK2P53671 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.83■■□□□ 1.09
LIMK2P53671 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.08
LIMK2P53671 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
LIMK2P53671 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
LIMK2P53671 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
LIMK2P53671 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LIMK2P53671 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LIMK2P53671 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
LIMK2P53671 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LIMK2P53671 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.82■■□□□ 1.08
LIMK2P53671 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
LIMK2P53671 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
LIMK2P53671 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
LIMK2P53671 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
LIMK2P53671 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
LIMK2P53671 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.82■■□□□ 1.08
LIMK2P53671 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LIMK2P53671 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LIMK2P53671 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LIMK2P53671 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
LIMK2P53671 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LIMK2P53671 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LIMK2P53671 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.81■■□□□ 1.08
LIMK2P53671 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LIMK2P53671 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
LIMK2P53671 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
LIMK2P53671 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
LIMK2P53671 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.81■■□□□ 1.08
LIMK2P53671 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.81■■□□□ 1.08
LIMK2P53671 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
LIMK2P53671 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.8■■□□□ 1.08
LIMK2P53671 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LIMK2P53671 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LIMK2P53671 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
LIMK2P53671 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LIMK2P53671 RASA4CP-201ENST00000424092 1398 ntBASIC21.8■■□□□ 1.08
LIMK2P53671 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.8■■□□□ 1.08
LIMK2P53671 AC026271.2-201ENST00000428091 497 ntBASIC21.8■■□□□ 1.08
LIMK2P53671 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.8■■□□□ 1.08
LIMK2P53671 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.8■■□□□ 1.08
LIMK2P53671 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
LIMK2P53671 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LIMK2P53671 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LIMK2P53671 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LIMK2P53671 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.79■■□□□ 1.08
LIMK2P53671 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
LIMK2P53671 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
LIMK2P53671 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms