Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.27■■□□□ 1
CLCNKAP51800 TERF1P2-201ENST00000583350 1212 ntBASIC21.27■■□□□ 1
CLCNKAP51800 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.27■■□□□ 1
CLCNKAP51800 BX005040.4-201ENST00000637145 1518 ntBASIC21.27■■□□□ 1
CLCNKAP51800 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLCNKAP51800 C1orf229-201ENST00000623686 2258 ntBASIC21.27■■□□□ 1
CLCNKAP51800 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.27■■□□□ 1
CLCNKAP51800 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.27■■□□□ 1
CLCNKAP51800 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLCNKAP51800 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
CLCNKAP51800 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CLCNKAP51800 AC087742.1-201ENST00000575880 1738 ntBASIC21.26■□□□□ 0.99
CLCNKAP51800 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.26■□□□□ 0.99
CLCNKAP51800 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CLCNKAP51800 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLCNKAP51800 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLCNKAP51800 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLCNKAP51800 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLCNKAP51800 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CLCNKAP51800 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.26■□□□□ 0.99
CLCNKAP51800 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.26■□□□□ 0.99
CLCNKAP51800 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CLCNKAP51800 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLCNKAP51800 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
CLCNKAP51800 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLCNKAP51800 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.25■□□□□ 0.99
CLCNKAP51800 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLCNKAP51800 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CLCNKAP51800 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLCNKAP51800 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.25■□□□□ 0.99
CLCNKAP51800 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLCNKAP51800 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
CLCNKAP51800 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLCNKAP51800 CCDC92B-201ENST00000575506 885 ntBASIC21.25■□□□□ 0.99
CLCNKAP51800 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLCNKAP51800 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLCNKAP51800 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CLCNKAP51800 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLCNKAP51800 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLCNKAP51800 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CLCNKAP51800 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CLCNKAP51800 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CLCNKAP51800 AL162430.1-201ENST00000480705 870 ntBASIC21.24■□□□□ 0.99
CLCNKAP51800 DUX4L2-201ENST00000561772 1275 ntBASIC21.24■□□□□ 0.99
CLCNKAP51800 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.24■□□□□ 0.99
CLCNKAP51800 DUX4L6-201ENST00000626483 1275 ntBASIC21.24■□□□□ 0.99
CLCNKAP51800 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CLCNKAP51800 DUX4L1-201ENST00000627662 1275 ntBASIC21.24■□□□□ 0.99
CLCNKAP51800 DUX4L8-201ENST00000629013 1275 ntBASIC21.24■□□□□ 0.99
CLCNKAP51800 DUX4L3-201ENST00000630187 1275 ntBASIC21.24■□□□□ 0.99
CLCNKAP51800 DUX4L7-201ENST00000630678 1275 ntBASIC21.24■□□□□ 0.99
CLCNKAP51800 DUX4L5-201ENST00000630834 1275 ntBASIC21.24■□□□□ 0.99
CLCNKAP51800 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLCNKAP51800 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.24■□□□□ 0.99
CLCNKAP51800 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLCNKAP51800 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLCNKAP51800 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLCNKAP51800 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLCNKAP51800 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CLCNKAP51800 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CLCNKAP51800 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CLCNKAP51800 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.23■□□□□ 0.99
CLCNKAP51800 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.23■□□□□ 0.99
CLCNKAP51800 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CLCNKAP51800 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLCNKAP51800 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CLCNKAP51800 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLCNKAP51800 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.22■□□□□ 0.99
CLCNKAP51800 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.22■□□□□ 0.99
CLCNKAP51800 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLCNKAP51800 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
CLCNKAP51800 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLCNKAP51800 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLCNKAP51800 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
CLCNKAP51800 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.21■□□□□ 0.99
CLCNKAP51800 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLCNKAP51800 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLCNKAP51800 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.21■□□□□ 0.99
CLCNKAP51800 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLCNKAP51800 KRT18P14-201ENST00000534205 1250 ntBASIC21.21■□□□□ 0.99
CLCNKAP51800 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.21■□□□□ 0.99
CLCNKAP51800 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLCNKAP51800 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLCNKAP51800 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLCNKAP51800 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLCNKAP51800 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLCNKAP51800 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLCNKAP51800 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.99
CLCNKAP51800 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
CLCNKAP51800 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.2■□□□□ 0.98
CLCNKAP51800 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.2■□□□□ 0.98
CLCNKAP51800 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.2■□□□□ 0.98
CLCNKAP51800 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.2■□□□□ 0.98
CLCNKAP51800 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.2■□□□□ 0.98
CLCNKAP51800 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.2■□□□□ 0.98
CLCNKAP51800 AC104564.3-201ENST00000582367 638 ntBASIC21.2■□□□□ 0.98
CLCNKAP51800 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.2■□□□□ 0.98
CLCNKAP51800 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLCNKAP51800 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLCNKAP51800 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms