Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.98■□□□□ 0.95
RAB28P51157 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.98■□□□□ 0.95
RAB28P51157 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RAB28P51157 LINC00526-201ENST00000581067 1875 ntBASIC20.98■□□□□ 0.95
RAB28P51157 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.98■□□□□ 0.95
RAB28P51157 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
RAB28P51157 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAB28P51157 AC139530.1-201ENST00000575312 1977 ntBASIC20.97■□□□□ 0.95
RAB28P51157 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAB28P51157 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.97■□□□□ 0.95
RAB28P51157 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.97■□□□□ 0.95
RAB28P51157 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.97■□□□□ 0.95
RAB28P51157 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAB28P51157 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.97■□□□□ 0.95
RAB28P51157 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
RAB28P51157 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RAB28P51157 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.97■□□□□ 0.95
RAB28P51157 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAB28P51157 AC012676.1-201ENST00000574705 1949 ntBASIC20.96■□□□□ 0.95
RAB28P51157 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAB28P51157 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RAB28P51157 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
RAB28P51157 AC027612.3-201ENST00000413684 1047 ntBASIC20.96■□□□□ 0.95
RAB28P51157 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.96■□□□□ 0.95
RAB28P51157 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.96■□□□□ 0.95
RAB28P51157 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAB28P51157 AC233723.2-201ENST00000623798 2106 ntBASIC20.96■□□□□ 0.95
RAB28P51157 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAB28P51157 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RAB28P51157 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAB28P51157 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
RAB28P51157 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.95■□□□□ 0.94
RAB28P51157 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAB28P51157 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RAB28P51157 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAB28P51157 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAB28P51157 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.95■□□□□ 0.94
RAB28P51157 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.95■□□□□ 0.94
RAB28P51157 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.95■□□□□ 0.94
RAB28P51157 MIR6084-201ENST00000622012 110 ntBASIC20.95■□□□□ 0.94
RAB28P51157 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAB28P51157 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RAB28P51157 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAB28P51157 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAB28P51157 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.95■□□□□ 0.94
RAB28P51157 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAB28P51157 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.94■□□□□ 0.94
RAB28P51157 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAB28P51157 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAB28P51157 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAB28P51157 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RAB28P51157 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.94■□□□□ 0.94
RAB28P51157 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.94■□□□□ 0.94
RAB28P51157 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RAB28P51157 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAB28P51157 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAB28P51157 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAB28P51157 AC080038.3-201ENST00000623346 1952 ntBASIC20.94■□□□□ 0.94
RAB28P51157 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
RAB28P51157 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RAB28P51157 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.93■□□□□ 0.94
RAB28P51157 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.93■□□□□ 0.94
RAB28P51157 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RAB28P51157 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RAB28P51157 BX005040.4-201ENST00000637145 1518 ntBASIC20.93■□□□□ 0.94
RAB28P51157 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAB28P51157 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAB28P51157 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.92■□□□□ 0.94
RAB28P51157 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAB28P51157 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.92■□□□□ 0.94
RAB28P51157 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.92■□□□□ 0.94
RAB28P51157 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RAB28P51157 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.92■□□□□ 0.94
RAB28P51157 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.92■□□□□ 0.94
RAB28P51157 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.92■□□□□ 0.94
RAB28P51157 AC133561.1-201ENST00000568600 2415 ntBASIC20.92■□□□□ 0.94
RAB28P51157 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAB28P51157 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAB28P51157 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RAB28P51157 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAB28P51157 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.91■□□□□ 0.94
RAB28P51157 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.91■□□□□ 0.94
RAB28P51157 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.91■□□□□ 0.94
RAB28P51157 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.91■□□□□ 0.94
RAB28P51157 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.91■□□□□ 0.94
RAB28P51157 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAB28P51157 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.9■□□□□ 0.94
RAB28P51157 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.9■□□□□ 0.94
RAB28P51157 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAB28P51157 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAB28P51157 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.9■□□□□ 0.94
RAB28P51157 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.9■□□□□ 0.94
RAB28P51157 YBX1P1-201ENST00000445822 960 ntBASIC20.9■□□□□ 0.94
RAB28P51157 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAB28P51157 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.9■□□□□ 0.94
RAB28P51157 AL034346.1-201ENST00000568244 1277 ntBASIC20.9■□□□□ 0.94
RAB28P51157 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAB28P51157 GUSBP5-202ENST00000510805 1989 ntBASIC20.9■□□□□ 0.94
RAB28P51157 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
RAB28P51157 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms