Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 AC092053.2-201ENST00000640557 1818 ntBASIC20.64■□□□□ 0.9
HLCSP50747 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HLCSP50747 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HLCSP50747 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HLCSP50747 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HLCSP50747 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
HLCSP50747 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HLCSP50747 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.64■□□□□ 0.89
HLCSP50747 FBXW4P1-201ENST00000426721 2239 ntBASIC20.64■□□□□ 0.89
HLCSP50747 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HLCSP50747 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.64■□□□□ 0.89
HLCSP50747 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.64■□□□□ 0.89
HLCSP50747 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.64■□□□□ 0.89
HLCSP50747 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HLCSP50747 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
HLCSP50747 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
HLCSP50747 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.64■□□□□ 0.89
HLCSP50747 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HLCSP50747 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
HLCSP50747 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.64■□□□□ 0.89
HLCSP50747 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.63■□□□□ 0.89
HLCSP50747 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
HLCSP50747 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HLCSP50747 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
HLCSP50747 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HLCSP50747 AC139530.1-201ENST00000575312 1977 ntBASIC20.63■□□□□ 0.89
HLCSP50747 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HLCSP50747 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HLCSP50747 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.63■□□□□ 0.89
HLCSP50747 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.63■□□□□ 0.89
HLCSP50747 pRNA.6-201ENST00000610482 90 ntBASIC20.63■□□□□ 0.89
HLCSP50747 pRNA.5-201ENST00000612139 90 ntBASIC20.63■□□□□ 0.89
HLCSP50747 pRNA.11-201ENST00000618423 90 ntBASIC20.63■□□□□ 0.89
HLCSP50747 pRNA.13-201ENST00000619112 90 ntBASIC20.63■□□□□ 0.89
HLCSP50747 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HLCSP50747 AL121603.2-201ENST00000557373 2117 ntBASIC20.63■□□□□ 0.89
HLCSP50747 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HLCSP50747 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
HLCSP50747 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.62■□□□□ 0.89
HLCSP50747 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.62■□□□□ 0.89
HLCSP50747 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
HLCSP50747 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
HLCSP50747 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HLCSP50747 AC091305.1-201ENST00000479476 895 ntBASIC20.62■□□□□ 0.89
HLCSP50747 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
HLCSP50747 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.62■□□□□ 0.89
HLCSP50747 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HLCSP50747 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.62■□□□□ 0.89
HLCSP50747 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.62■□□□□ 0.89
HLCSP50747 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
HLCSP50747 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HLCSP50747 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HLCSP50747 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HLCSP50747 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.61■□□□□ 0.89
HLCSP50747 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HLCSP50747 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HLCSP50747 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
HLCSP50747 FP325331.1-202ENST00000623531 1380 ntBASIC20.6■□□□□ 0.89
HLCSP50747 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HLCSP50747 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.6■□□□□ 0.89
HLCSP50747 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HLCSP50747 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
HLCSP50747 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HLCSP50747 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HLCSP50747 ZNRF2P3-201ENST00000424200 374 ntBASIC20.6■□□□□ 0.89
HLCSP50747 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.6■□□□□ 0.89
HLCSP50747 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
HLCSP50747 AC027682.1-201ENST00000562846 899 ntBASIC20.6■□□□□ 0.89
HLCSP50747 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HLCSP50747 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.6■□□□□ 0.89
HLCSP50747 RASA4CP-201ENST00000424092 1398 ntBASIC20.59■□□□□ 0.89
HLCSP50747 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
HLCSP50747 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLCSP50747 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HLCSP50747 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
HLCSP50747 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLCSP50747 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLCSP50747 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.59■□□□□ 0.89
HLCSP50747 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HLCSP50747 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.59■□□□□ 0.89
HLCSP50747 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.59■□□□□ 0.89
HLCSP50747 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HLCSP50747 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
HLCSP50747 PKD1P6-201ENST00000343738 4769 ntBASIC20.59■□□□□ 0.89
HLCSP50747 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLCSP50747 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLCSP50747 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.59■□□□□ 0.89
HLCSP50747 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
HLCSP50747 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HLCSP50747 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
HLCSP50747 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.58■□□□□ 0.89
HLCSP50747 AC008764.7-201ENST00000593779 1081 ntBASIC20.58■□□□□ 0.89
HLCSP50747 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.58■□□□□ 0.89
HLCSP50747 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
HLCSP50747 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HLCSP50747 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.58■□□□□ 0.89
HLCSP50747 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HLCSP50747 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.58■□□□□ 0.88
HLCSP50747 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
HLCSP50747 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms