Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
THBS3P49746 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
THBS3P49746 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
THBS3P49746 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
THBS3P49746 AC080038.3-201ENST00000623346 1952 ntBASIC17.86■□□□□ 0.45
THBS3P49746 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
THBS3P49746 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
THBS3P49746 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.86■□□□□ 0.45
THBS3P49746 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.85■□□□□ 0.45
THBS3P49746 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
THBS3P49746 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
THBS3P49746 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
THBS3P49746 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
THBS3P49746 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
THBS3P49746 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.85■□□□□ 0.45
THBS3P49746 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
THBS3P49746 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
THBS3P49746 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.84■□□□□ 0.45
THBS3P49746 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
THBS3P49746 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.84■□□□□ 0.45
THBS3P49746 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.84■□□□□ 0.45
THBS3P49746 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
THBS3P49746 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
THBS3P49746 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
THBS3P49746 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
THBS3P49746 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
THBS3P49746 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
THBS3P49746 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
THBS3P49746 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.84■□□□□ 0.45
THBS3P49746 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
THBS3P49746 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
THBS3P49746 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
THBS3P49746 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
THBS3P49746 AC241377.3-202ENST00000626088 1088 ntBASIC17.84■□□□□ 0.45
THBS3P49746 AC241585.3-202ENST00000628937 1088 ntBASIC17.84■□□□□ 0.45
THBS3P49746 AC245100.8-202ENST00000629247 1058 ntBASIC17.84■□□□□ 0.45
THBS3P49746 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
THBS3P49746 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
THBS3P49746 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
THBS3P49746 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
THBS3P49746 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
THBS3P49746 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
THBS3P49746 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
THBS3P49746 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.84■□□□□ 0.45
THBS3P49746 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.83■□□□□ 0.45
THBS3P49746 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
THBS3P49746 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.83■□□□□ 0.45
THBS3P49746 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
THBS3P49746 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.83■□□□□ 0.45
THBS3P49746 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.83■□□□□ 0.45
THBS3P49746 AC137767.1-201ENST00000602918 1920 ntBASIC17.83■□□□□ 0.44
THBS3P49746 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
THBS3P49746 NALT1-201ENST00000429224 738 ntTSL 5 BASIC17.83■□□□□ 0.44
THBS3P49746 AL139246.5-201ENST00000606645 996 ntBASIC17.83■□□□□ 0.44
THBS3P49746 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.83■□□□□ 0.44
THBS3P49746 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
THBS3P49746 C11orf96-202ENST00000528572 1834 ntBASIC17.83■□□□□ 0.44
THBS3P49746 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.83■□□□□ 0.44
THBS3P49746 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
THBS3P49746 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
THBS3P49746 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
THBS3P49746 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
THBS3P49746 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
THBS3P49746 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.82■□□□□ 0.44
THBS3P49746 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
THBS3P49746 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
THBS3P49746 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.82■□□□□ 0.44
THBS3P49746 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
THBS3P49746 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
THBS3P49746 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
THBS3P49746 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
THBS3P49746 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
THBS3P49746 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
THBS3P49746 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
THBS3P49746 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.82■□□□□ 0.44
THBS3P49746 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17.82■□□□□ 0.44
THBS3P49746 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
THBS3P49746 MIR4466-201ENST00000606121 54 ntBASIC17.82■□□□□ 0.44
THBS3P49746 AL499627.2-201ENST00000606283 725 ntBASIC17.82■□□□□ 0.44
THBS3P49746 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.82■□□□□ 0.44
THBS3P49746 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC17.82■□□□□ 0.44
THBS3P49746 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.82■□□□□ 0.44
THBS3P49746 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
THBS3P49746 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.82■□□□□ 0.44
THBS3P49746 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
THBS3P49746 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
THBS3P49746 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
THBS3P49746 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
THBS3P49746 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
THBS3P49746 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
THBS3P49746 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.81■□□□□ 0.44
THBS3P49746 AL512631.2-201ENST00000604634 923 ntBASIC17.81■□□□□ 0.44
THBS3P49746 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.81■□□□□ 0.44
THBS3P49746 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
THBS3P49746 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
THBS3P49746 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
THBS3P49746 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
THBS3P49746 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.81■□□□□ 0.44
THBS3P49746 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.81■□□□□ 0.44
THBS3P49746 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms