Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC9A3P48764 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC9A3P48764 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SLC9A3P48764 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC9A3P48764 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SLC9A3P48764 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SLC9A3P48764 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.79■□□□□ 0.76
SLC9A3P48764 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
SLC9A3P48764 CA15P2-201ENST00000611168 834 ntBASIC19.79■□□□□ 0.76
SLC9A3P48764 AC241377.3-202ENST00000626088 1088 ntBASIC19.79■□□□□ 0.76
SLC9A3P48764 AC241585.3-202ENST00000628937 1088 ntBASIC19.79■□□□□ 0.76
SLC9A3P48764 AC245100.8-202ENST00000629247 1058 ntBASIC19.79■□□□□ 0.76
SLC9A3P48764 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC9A3P48764 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.79■□□□□ 0.76
SLC9A3P48764 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SLC9A3P48764 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
SLC9A3P48764 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SLC9A3P48764 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC9A3P48764 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.78■□□□□ 0.76
SLC9A3P48764 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC9A3P48764 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SLC9A3P48764 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SLC9A3P48764 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC9A3P48764 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.78■□□□□ 0.76
SLC9A3P48764 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC9A3P48764 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC9A3P48764 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC9A3P48764 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC9A3P48764 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.78■□□□□ 0.76
SLC9A3P48764 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SLC9A3P48764 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.78■□□□□ 0.76
SLC9A3P48764 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.78■□□□□ 0.76
SLC9A3P48764 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SLC9A3P48764 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC9A3P48764 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC9A3P48764 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC9A3P48764 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC9A3P48764 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SLC9A3P48764 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
SLC9A3P48764 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.77■□□□□ 0.76
SLC9A3P48764 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SLC9A3P48764 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.77■□□□□ 0.76
SLC9A3P48764 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC9A3P48764 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
SLC9A3P48764 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC9A3P48764 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC9A3P48764 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.77■□□□□ 0.75
SLC9A3P48764 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.75
SLC9A3P48764 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC9A3P48764 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC9A3P48764 FBXW4P1-201ENST00000426721 2239 ntBASIC19.76■□□□□ 0.75
SLC9A3P48764 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC9A3P48764 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC9A3P48764 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC9A3P48764 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.76■□□□□ 0.75
SLC9A3P48764 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC9A3P48764 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC9A3P48764 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC9A3P48764 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC9A3P48764 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SLC9A3P48764 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
SLC9A3P48764 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.75■□□□□ 0.75
SLC9A3P48764 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
SLC9A3P48764 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC9A3P48764 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SLC9A3P48764 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SLC9A3P48764 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC9A3P48764 KRT16P3-201ENST00000439127 1283 ntBASIC19.75■□□□□ 0.75
SLC9A3P48764 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.75■□□□□ 0.75
SLC9A3P48764 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.75■□□□□ 0.75
SLC9A3P48764 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC9A3P48764 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC9A3P48764 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC9A3P48764 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC9A3P48764 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC9A3P48764 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.75■□□□□ 0.75
SLC9A3P48764 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
SLC9A3P48764 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC9A3P48764 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
SLC9A3P48764 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.74■□□□□ 0.75
SLC9A3P48764 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC9A3P48764 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SLC9A3P48764 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.74■□□□□ 0.75
SLC9A3P48764 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SLC9A3P48764 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.74■□□□□ 0.75
SLC9A3P48764 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.74■□□□□ 0.75
SLC9A3P48764 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.74■□□□□ 0.75
SLC9A3P48764 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.74■□□□□ 0.75
SLC9A3P48764 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC9A3P48764 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC9A3P48764 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.74■□□□□ 0.75
SLC9A3P48764 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC9A3P48764 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.74■□□□□ 0.75
SLC9A3P48764 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.74■□□□□ 0.75
SLC9A3P48764 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC9A3P48764 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC9A3P48764 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC9A3P48764 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLC9A3P48764 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.73■□□□□ 0.75
SLC9A3P48764 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms