Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 tC(GCA)BtC(GCA)B 72 nt2.46□□□□□ -2.02
VPS55P47111 tC(GCA)GtC(GCA)G 72 nt2.46□□□□□ -2.02
VPS55P47111 tC(GCA)P1tC(GCA)P1 72 nt2.46□□□□□ -2.02
VPS55P47111 tC(GCA)P2tC(GCA)P2 72 nt2.46□□□□□ -2.02
VPS55P47111 DSD1YGL196W 1287 nt2.46□□□□□ -2.02
VPS55P47111 PAN5YHR063C 1140 nt2.46□□□□□ -2.02
VPS55P47111 YJL175WYJL175W 513 nt2.46□□□□□ -2.02
VPS55P47111 MAK16YAL025C 921 nt2.46□□□□□ -2.02
VPS55P47111 RPL17AYKL180W 555 nt2.46□□□□□ -2.02
VPS55P47111 ELO3YLR372W 1038 nt2.46□□□□□ -2.02
VPS55P47111 NCE103YNL036W 666 nt2.46□□□□□ -2.02
VPS55P47111 CHO2YGR157W 2610 nt2.46□□□□□ -2.02
VPS55P47111 CDC40YDR364C 1368 nt2.46□□□□□ -2.02
VPS55P47111 UBP5YER144C 2418 nt2.46□□□□□ -2.02
VPS55P47111 BCH2YKR027W 2298 nt2.45□□□□□ -2.02
VPS55P47111 ERG9YHR190W 1335 nt2.45□□□□□ -2.02
VPS55P47111 SUP45YBR143C 1314 nt2.45□□□□□ -2.02
VPS55P47111 PAM1YDR251W 2493 nt2.45□□□□□ -2.02
VPS55P47111 APC9YLR102C 798 nt2.45□□□□□ -2.02
VPS55P47111 MRPL16YBL038W 699 nt2.45□□□□□ -2.02
VPS55P47111 MDJ2YNL328C 441 nt2.45□□□□□ -2.02
VPS55P47111 DSF2YBR007C 2211 nt2.45□□□□□ -2.02
VPS55P47111 SNT1YCR033W 3681 nt2.45□□□□□ -2.02
VPS55P47111 POL3YDL102W 3294 nt2.44□□□□□ -2.02
VPS55P47111 ATG32YIL146C 1590 nt2.44□□□□□ -2.02
VPS55P47111 YTA7YGR270W 4140 nt2.44□□□□□ -2.02
VPS55P47111 ULP1YPL020C 1866 nt2.44□□□□□ -2.02
VPS55P47111 DYN2YDR424C 279 nt2.44□□□□□ -2.02
VPS55P47111 ARD1YHR013C 717 nt2.44□□□□□ -2.02
VPS55P47111 YPT35YHR105W 645 nt2.44□□□□□ -2.02
VPS55P47111 PHD1YKL043W 1101 nt2.44□□□□□ -2.02
VPS55P47111 YML053CYML053C 639 nt2.44□□□□□ -2.02
VPS55P47111 YGK3YOL128C 1128 nt2.44□□□□□ -2.02
VPS55P47111 BUD21YOR078W 645 nt2.44□□□□□ -2.02
VPS55P47111 FLO1YAR050W 4614 nt2.44□□□□□ -2.02
VPS55P47111 CDH1YGL003C 1701 nt2.44□□□□□ -2.02
VPS55P47111 SRC1YML034W 2505 nt2.44□□□□□ -2.02
VPS55P47111 TCP1YDR212W 1680 nt2.44□□□□□ -2.02
VPS55P47111 PCI8YIL071C 1335 nt2.43□□□□□ -2.02
VPS55P47111 MOT1YPL082C 5604 nt2.43□□□□□ -2.02
VPS55P47111 YCL075WYCL075W 441 nt2.43□□□□□ -2.02
VPS55P47111 UBC1YDR177W 648 nt2.43□□□□□ -2.02
VPS55P47111 NKP1YDR383C 717 nt2.43□□□□□ -2.02
VPS55P47111 YER067C-AYER067C-A 324 nt2.43□□□□□ -2.02
VPS55P47111 SCM4YGR049W 564 nt2.43□□□□□ -2.02
VPS55P47111 YIL025CYIL025C 375 nt2.43□□□□□ -2.02
VPS55P47111 RPN13YLR421C 471 nt2.43□□□□□ -2.02
VPS55P47111 YBL039W-BYBL039W-B 180 nt2.43□□□□□ -2.02
VPS55P47111 YTH1YPR107C 627 nt2.43□□□□□ -2.02
VPS55P47111 PRS5YOL061W 1491 nt2.43□□□□□ -2.02
VPS55P47111 RGC1YPR115W 3252 nt2.43□□□□□ -2.02
VPS55P47111 YIL082W-AYIL082W-A 4497 nt2.42□□□□□ -2.02
VPS55P47111 ARP4YJL081C 1470 nt2.42□□□□□ -2.02
VPS55P47111 RPL30YGL030W 318 nt2.42□□□□□ -2.02
VPS55P47111 YKL091CYKL091C 933 nt2.42□□□□□ -2.02
VPS55P47111 EMG1YLR186W 759 nt2.42□□□□□ -2.02
VPS55P47111 CSM3YMR048W 954 nt2.42□□□□□ -2.02
VPS55P47111 YNL228WYNL228W 777 nt2.42□□□□□ -2.02
VPS55P47111 YPS6YIR039C 1614 nt2.42□□□□□ -2.02
VPS55P47111 UBC6YER100W 753 nt2.41□□□□□ -2.02
VPS55P47111 YGL214WYGL214W 486 nt2.41□□□□□ -2.02
VPS55P47111 LST7YGR057C 729 nt2.41□□□□□ -2.02
VPS55P47111 YGR107WYGR107W 450 nt2.41□□□□□ -2.02
VPS55P47111 YLL017WYLL017W 312 nt2.41□□□□□ -2.02
VPS55P47111 YMR316C-AYMR316C-A 312 nt2.41□□□□□ -2.02
VPS55P47111 TIM12YBR091C 330 nt2.41□□□□□ -2.02
VPS55P47111 YLR345WYLR345W 1530 nt2.41□□□□□ -2.02
VPS55P47111 IMD4YML056C 1575 nt2.4□□□□□ -2.02
VPS55P47111 VAC17YCL063W 1272 nt2.4□□□□□ -2.03
VPS55P47111 MIX14YDR031W 366 nt2.4□□□□□ -2.03
VPS55P47111 tQ(UUG)BtQ(UUG)B 72 nt2.4□□□□□ -2.03
VPS55P47111 DOG2YHR043C 741 nt2.4□□□□□ -2.03
VPS55P47111 YLR012CYLR012C 300 nt2.4□□□□□ -2.03
VPS55P47111 FOL3YMR113W 1284 nt2.4□□□□□ -2.03
VPS55P47111 RPC34YNR003C 954 nt2.4□□□□□ -2.03
VPS55P47111 TPK2YPL203W 1143 nt2.4□□□□□ -2.03
VPS55P47111 YBR300CYBR300C 498 nt2.4□□□□□ -2.03
VPS55P47111 TAO3YIL129C 7131 nt2.4□□□□□ -2.03
VPS55P47111 CCT7YJL111W 1653 nt2.4□□□□□ -2.03
VPS55P47111 VPS30YPL120W 1674 nt2.4□□□□□ -2.03
VPS55P47111 POL1YNL102W 4407 nt2.4□□□□□ -2.03
VPS55P47111 GSH2YOL049W 1476 nt2.39□□□□□ -2.03
VPS55P47111 ROK1YGL171W 1695 nt2.39□□□□□ -2.03
VPS55P47111 MGT1YDL200C 567 nt2.39□□□□□ -2.03
VPS55P47111 NOP6YDL213C 678 nt2.39□□□□□ -2.03
VPS55P47111 RTT103YDR289C 1230 nt2.39□□□□□ -2.03
VPS55P47111 PIR1YKL164C 1026 nt2.39□□□□□ -2.03
VPS55P47111 YLR036CYLR036C 612 nt2.39□□□□□ -2.03
VPS55P47111 YMR294W-AYMR294W-A 360 nt2.39□□□□□ -2.03
VPS55P47111 PSF3YOL146W 585 nt2.39□□□□□ -2.03
VPS55P47111 TMC1YOR052C 453 nt2.39□□□□□ -2.03
VPS55P47111 YBR053CYBR053C 1077 nt2.39□□□□□ -2.03
VPS55P47111 YKL050CYKL050C 2769 nt2.39□□□□□ -2.03
VPS55P47111 ORC4YPR162C 1590 nt2.39□□□□□ -2.03
VPS55P47111 YCR050CYCR050C 309 nt2.38□□□□□ -2.03
VPS55P47111 PPH3YDR075W 927 nt2.38□□□□□ -2.03
VPS55P47111 SLI1YGR212W 1407 nt2.38□□□□□ -2.03
VPS55P47111 COS8YHL048W 1146 nt2.38□□□□□ -2.03
VPS55P47111 THP2YHR167W 786 nt2.38□□□□□ -2.03
VPS55P47111 RSM25YIL093C 795 nt2.38□□□□□ -2.03
Retrieved 100 of 7,029 protein–RNA pairs in 21.7 ms