Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.988e-7■■■■□ 24.8
MATR3P43243 HKR1-203ENST00000541583 2758 ntTSL 1 (best) BASIC8.61□□□□□ -1.038e-7■■■■□ 24.8
MATR3P43243 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.032e-6■■■■□ 24.8
MATR3P43243 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC8.58□□□□□ -1.048e-7■■■■□ 24.8
MATR3P43243 HKR1-217ENST00000590570 579 ntTSL 48.49□□□□□ -1.058e-7■■■■□ 24.8
MATR3P43243 PCBP1-AS1-334ENST00000628837 866 ntTSL 58.41□□□□□ -1.068e-7■■■■□ 24.8
MATR3P43243 PCBP1-AS1-252ENST00000598586 693 ntTSL 58.2□□□□□ -1.18e-7■■■■□ 24.8
MATR3P43243 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC8.15□□□□□ -1.18e-7■■■■□ 24.8
MATR3P43243 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC7.89□□□□□ -1.158e-7■■■■□ 24.8
MATR3P43243 PCBP1-AS1-342ENST00000629304 397 ntTSL 57.86□□□□□ -1.158e-7■■■■□ 24.8
MATR3P43243 ARMCX5-GPRASP2-208ENST00000602366 573 ntTSL 47.46□□□□□ -1.221e-6■■■■□ 24.8
MATR3P43243 TDP2-203ENST00000478285 857 ntTSL 27.39□□□□□ -1.238e-7■■■■□ 24.8
MATR3P43243 PCBP1-AS1-363ENST00000630522 927 ntTSL 57.38□□□□□ -1.238e-7■■■■□ 24.8
MATR3P43243 PCBP1-AS1-271ENST00000617142 658 ntTSL 57.05□□□□□ -1.288e-7■■■■□ 24.8
MATR3P43243 PCBP1-AS1-341ENST00000629212 827 ntTSL 57.05□□□□□ -1.288e-7■■■■□ 24.8
MATR3P43243 PCBP1-AS1-301ENST00000626769 602 ntTSL 56.79□□□□□ -1.328e-7■■■■□ 24.8
MATR3P43243 TVP23B-210ENST00000582288 336 ntTSL 36.68□□□□□ -1.341e-6■■■■□ 24.8
MATR3P43243 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.56□□□□□ -1.368e-7■■■■□ 24.8
MATR3P43243 RABGAP1L-221ENST00000529474 524 ntTSL 46.56□□□□□ -1.368e-7■■■■□ 24.8
MATR3P43243 ERCC6L2-202ENST00000320486 2936 ntTSL 1 (best)6.55□□□□□ -1.368e-7■■■■□ 24.8
MATR3P43243 UBE2H-206ENST00000483368 619 ntTSL 1 (best)6.53□□□□□ -1.366e-13■■■■□ 24.8
MATR3P43243 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.368e-7■■■■□ 24.8
MATR3P43243 AFG1L-202ENST00000421954 1741 ntTSL 56.5□□□□□ -1.378e-7■■■■□ 24.8
MATR3P43243 PCBP1-AS1-312ENST00000627325 673 ntTSL 56.42□□□□□ -1.388e-7■■■■□ 24.8
MATR3P43243 PCBP1-AS1-358ENST00000630280 566 ntTSL 56.28□□□□□ -1.48e-7■■■■□ 24.8
MATR3P43243 AFG1L-205ENST00000437715 742 ntTSL 56.25□□□□□ -1.418e-7■■■■□ 24.8
MATR3P43243 HS2ST1-203ENST00000591456 540 ntTSL 46.22□□□□□ -1.418e-7■■■■□ 24.8
MATR3P43243 CTNNA1-219ENST00000520158 719 ntTSL 36.1□□□□□ -1.436e-8■■■■□ 24.8
MATR3P43243 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.438e-7■■■■□ 24.8
MATR3P43243 NBAS-207ENST00000441755 844 ntTSL 35.98□□□□□ -1.456e-7■■■■□ 24.8
MATR3P43243 PCBP1-AS1-289ENST00000626343 910 ntTSL 55.73□□□□□ -1.498e-7■■■■□ 24.8
MATR3P43243 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.538e-7■■■■□ 24.8
MATR3P43243 ERCC6L2-208ENST00000479391 2849 ntTSL 1 (best)5.32□□□□□ -1.568e-7■■■■□ 24.8
MATR3P43243 PCBP1-AS1-284ENST00000625838 609 ntTSL 54.8□□□□□ -1.648e-7■■■■□ 24.8
MATR3P43243 PTK2-250ENST00000523746 574 ntTSL 44.47□□□□□ -1.692e-7■■■■□ 24.8
MATR3P43243 CTNNA1-209ENST00000518585 568 ntTSL 44.34□□□□□ -1.716e-8■■■■□ 24.8
MATR3P43243 TRIQK-218ENST00000523375 646 ntTSL 34.13□□□□□ -1.758e-7■■■■□ 24.8
MATR3P43243 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.758e-7■■■■□ 24.8
MATR3P43243 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.778e-7■■■■□ 24.8
MATR3P43243 MYSM1-201ENST00000401044 3176 ntTSL 1 (best)3.99□□□□□ -1.778e-7■■■■□ 24.8
MATR3P43243 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.89□□□□□ -1.798e-7■■■■□ 24.8
MATR3P43243 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.798e-7■■■■□ 24.8
MATR3P43243 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.858e-7■■■■□ 24.8
MATR3P43243 DCAF6-209ENST00000470919 827 ntTSL 23.3□□□□□ -1.888e-7■■■■□ 24.8
MATR3P43243 TRIQK-205ENST00000518400 617 ntTSL 33.13□□□□□ -1.918e-7■■■■□ 24.8
MATR3P43243 FSD1L-205ENST00000480279 566 ntTSL 32.98□□□□□ -1.938e-7■■■■□ 24.8
MATR3P43243 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.87□□□□□ -1.958e-7■■■■□ 24.8
MATR3P43243 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.82□□□□□ -1.968e-7■■■■□ 24.8
MATR3P43243 MYSM1-207ENST00000493821 7793 ntTSL 1 (best)2.74□□□□□ -1.978e-7■■■■□ 24.8
MATR3P43243 TRIQK-210ENST00000520384 556 ntTSL 51.96□□□□□ -2.18e-7■■■■□ 24.8
MATR3P43243 NDRG2-276ENST00000557676 633 ntTSL 227.76■■■□□ 2.038e-10■■■■□ 24.8
MATR3P43243 NDRG2-245ENST00000555657 578 ntTSL 526.6■■□□□ 1.858e-10■■■■□ 24.8
MATR3P43243 NDRG2-247ENST00000555733 924 ntTSL 525.44■■□□□ 1.668e-10■■■■□ 24.8
MATR3P43243 NDRG2-254ENST00000556420 671 ntTSL 424.95■■□□□ 1.588e-10■■■■□ 24.8
MATR3P43243 NDRG2-241ENST00000555142 609 ntTSL 523.94■■□□□ 1.428e-10■■■■□ 24.8
MATR3P43243 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.128e-10■■■■□ 24.8
MATR3P43243 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.068e-10■■■■□ 24.8
MATR3P43243 NDRG2-235ENST00000554489 573 ntTSL 420.97■□□□□ 0.958e-10■■■■□ 24.8
MATR3P43243 NDRG2-243ENST00000555384 775 ntTSL 520.79■□□□□ 0.928e-10■■■■□ 24.8
MATR3P43243 NDRG2-239ENST00000554893 578 ntTSL 420.79■□□□□ 0.928e-10■■■■□ 24.8
MATR3P43243 UBE2Q2-203ENST00000561723 575 ntTSL 420.78■□□□□ 0.928e-7■■■■□ 24.8
MATR3P43243 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.76■□□□□ 0.918e-7■■■■□ 24.8
MATR3P43243 NDRG2-238ENST00000554833 571 ntTSL 420.68■□□□□ 0.98e-10■■■■□ 24.8
MATR3P43243 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.67■□□□□ 0.98e-7■■■■□ 24.8
MATR3P43243 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.888e-10■■■■□ 24.8
MATR3P43243 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.758e-7■■■■□ 24.8
MATR3P43243 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.66■□□□□ 0.748e-10■■■■□ 24.8
MATR3P43243 NDRG2-252ENST00000556329 609 ntTSL 419.17■□□□□ 0.668e-10■■■■□ 24.8
MATR3P43243 NDRG2-220ENST00000553784 943 ntTSL 218.58■□□□□ 0.568e-10■■■■□ 24.8
MATR3P43243 NDRG2-266ENST00000557198 583 ntTSL 218.56■□□□□ 0.568e-10■■■■□ 24.8
MATR3P43243 NDRG2-270ENST00000557318 515 ntTSL 218.56■□□□□ 0.568e-10■■■■□ 24.8
MATR3P43243 NDRG2-268ENST00000557274 571 ntTSL 518.45■□□□□ 0.548e-10■■■■□ 24.8
MATR3P43243 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.548e-10■■■■□ 24.8
MATR3P43243 NDRG2-237ENST00000554561 632 ntTSL 217.62■□□□□ 0.418e-10■■■■□ 24.8
MATR3P43243 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.418e-10■■■■□ 24.8
MATR3P43243 NDRG2-271ENST00000557353 1919 ntTSL 217.43■□□□□ 0.388e-10■■■■□ 24.8
MATR3P43243 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.378e-10■■■■□ 24.8
MATR3P43243 POC5-212ENST00000512125 975 ntTSL 1 (best)17.16■□□□□ 0.348e-7■■■■□ 24.8
MATR3P43243 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.97■□□□□ 0.318e-10■■■■□ 24.8
MATR3P43243 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.95■□□□□ 0.38e-10■■■■□ 24.8
MATR3P43243 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.298e-10■■■■□ 24.8
MATR3P43243 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.298e-10■■■■□ 24.8
MATR3P43243 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.39■□□□□ 0.218e-10■■■■□ 24.8
MATR3P43243 NDRG2-273ENST00000557616 579 ntTSL 516.19■□□□□ 0.188e-10■■■■□ 24.8
MATR3P43243 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC15.59■□□□□ 0.098e-10■■■■□ 24.8
MATR3P43243 POC5-206ENST00000503835 896 ntTSL 515.48■□□□□ 0.078e-7■■■■□ 24.8
MATR3P43243 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.028e-7■■■■□ 24.8
MATR3P43243 POC5-208ENST00000506164 443 ntTSL 315.03■□□□□ -08e-7■■■■□ 24.8
MATR3P43243 NDRG2-265ENST00000557182 559 ntTSL 415.02■□□□□ -08e-10■■■■□ 24.8
MATR3P43243 NDRG2-231ENST00000554415 554 ntTSL 414.92□□□□□ -0.028e-10■■■■□ 24.8
MATR3P43243 NDRG2-257ENST00000556688 583 ntTSL 514.86□□□□□ -0.038e-10■■■■□ 24.8
MATR3P43243 NDRG2-232ENST00000554419 583 ntTSL 314.77□□□□□ -0.058e-10■■■■□ 24.8
MATR3P43243 NDRG2-259ENST00000556924 603 ntTSL 414.72□□□□□ -0.058e-10■■■■□ 24.8
MATR3P43243 NDRG2-225ENST00000554094 595 ntTSL 514.64□□□□□ -0.078e-10■■■■□ 24.8
MATR3P43243 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC14.5□□□□□ -0.098e-10■■■■□ 24.8
MATR3P43243 POC5-210ENST00000508467 577 ntTSL 214.42□□□□□ -0.18e-7■■■■□ 24.8
MATR3P43243 NDRG2-260ENST00000556974 1012 ntTSL 514.35□□□□□ -0.118e-10■■■■□ 24.8
MATR3P43243 NDRG2-230ENST00000554398 565 ntTSL 414.32□□□□□ -0.128e-10■■■■□ 24.8
MATR3P43243 NDRG2-223ENST00000553867 848 ntTSL 514.32□□□□□ -0.128e-10■■■■□ 24.8
MATR3P43243 POC5-204ENST00000502826 401 ntTSL 314.17□□□□□ -0.148e-7■■■■□ 24.8
Retrieved 100 of 16,209 protein–RNA pairs in 111.4 ms