Protein–RNA interactions for Protein: P41817

CUP9, Homeobox protein CUP9, yeastyeast

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUP9P41817 BMT2YBR141C 1014 nt2.93□□□□□ -1.94
CUP9P41817 YLR352WYLR352W 2424 nt2.93□□□□□ -1.94
CUP9P41817 PKH1YDR490C 2301 nt2.92□□□□□ -1.94
CUP9P41817 SEA4YBL104C 3117 nt2.92□□□□□ -1.94
CUP9P41817 FAP7YDL166C 594 nt2.92□□□□□ -1.94
CUP9P41817 YFL065CYFL065C 309 nt2.92□□□□□ -1.94
CUP9P41817 YGR126WYGR126W 693 nt2.92□□□□□ -1.94
CUP9P41817 YHR214C-EYHR214C-E 300 nt2.92□□□□□ -1.94
CUP9P41817 YAR070CYAR070C 300 nt2.92□□□□□ -1.94
CUP9P41817 RAD33YML011C 534 nt2.92□□□□□ -1.94
CUP9P41817 MRPL16YBL038W 699 nt2.92□□□□□ -1.94
CUP9P41817 ERG2YMR202W 669 nt2.92□□□□□ -1.94
CUP9P41817 YMR316C-AYMR316C-A 312 nt2.92□□□□□ -1.94
CUP9P41817 YSF3YNL138W-A 258 nt2.92□□□□□ -1.94
CUP9P41817 SYT1YPR095C 3681 nt2.92□□□□□ -1.94
CUP9P41817 DNM1YLL001W 2274 nt2.91□□□□□ -1.94
CUP9P41817 SKP2YNL311C 2292 nt2.91□□□□□ -1.94
CUP9P41817 SSM4YIL030C 3960 nt2.91□□□□□ -1.94
CUP9P41817 TCM62YBR044C 1719 nt2.91□□□□□ -1.94
CUP9P41817 PRM2YIL037C 1971 nt2.91□□□□□ -1.94
CUP9P41817 PRP22YER013W 3438 nt2.91□□□□□ -1.94
CUP9P41817 STE23YLR389C 3084 nt2.91□□□□□ -1.94
CUP9P41817 YLR177WYLR177W 1887 nt2.91□□□□□ -1.94
CUP9P41817 FCF1YDR339C 570 nt2.91□□□□□ -1.94
CUP9P41817 TIM21YGR033C 720 nt2.91□□□□□ -1.94
CUP9P41817 MRP13YGR084C 1020 nt2.91□□□□□ -1.94
CUP9P41817 MRPS35YGR165W 1038 nt2.91□□□□□ -1.94
CUP9P41817 REE1YJL217W 597 nt2.91□□□□□ -1.94
CUP9P41817 YLR012CYLR012C 300 nt2.91□□□□□ -1.94
CUP9P41817 MTR4YJL050W 3222 nt2.91□□□□□ -1.94
CUP9P41817 ARG5,6YER069W 2592 nt2.91□□□□□ -1.94
CUP9P41817 NOP4YPL043W 2058 nt2.91□□□□□ -1.94
CUP9P41817 YRB30YGL164C 1323 nt2.91□□□□□ -1.94
CUP9P41817 NTO1YPR031W 2247 nt2.91□□□□□ -1.94
CUP9P41817 ACK1YDL203C 1872 nt2.9□□□□□ -1.94
CUP9P41817 STU2YLR045C 2667 nt2.9□□□□□ -1.94
CUP9P41817 SIP1YDR422C 2448 nt2.9□□□□□ -1.94
CUP9P41817 PUF2YPR042C 3228 nt2.9□□□□□ -1.94
CUP9P41817 POL1YNL102W 4407 nt2.9□□□□□ -1.94
CUP9P41817 THR4YCR053W 1545 nt2.9□□□□□ -1.95
CUP9P41817 PAM1YDR251W 2493 nt2.9□□□□□ -1.95
CUP9P41817 RPS18AYDR450W 441 nt2.9□□□□□ -1.95
CUP9P41817 APA2YDR530C 978 nt2.9□□□□□ -1.95
CUP9P41817 YGR015CYGR015C 987 nt2.9□□□□□ -1.95
CUP9P41817 RSM25YIL093C 795 nt2.9□□□□□ -1.95
CUP9P41817 GCD14YJL125C 1152 nt2.9□□□□□ -1.95
CUP9P41817 YJL175WYJL175W 513 nt2.9□□□□□ -1.95
CUP9P41817 MAK16YAL025C 921 nt2.9□□□□□ -1.95
CUP9P41817 MRP8YKL142W 660 nt2.9□□□□□ -1.95
CUP9P41817 REH1YLR387C 1299 nt2.9□□□□□ -1.95
CUP9P41817 NCE103YNL036W 666 nt2.9□□□□□ -1.95
CUP9P41817 LDS2YOL047C 1071 nt2.9□□□□□ -1.95
CUP9P41817 PWP2YCR057C 2772 nt2.9□□□□□ -1.95
CUP9P41817 CIT1YNR001C 1440 nt2.9□□□□□ -1.95
CUP9P41817 PBS2YJL128C 2007 nt2.9□□□□□ -1.95
CUP9P41817 VID27YNL212W 2349 nt2.9□□□□□ -1.95
CUP9P41817 YHR202WYHR202W 1809 nt2.89□□□□□ -1.95
CUP9P41817 YCL075WYCL075W 441 nt2.89□□□□□ -1.95
CUP9P41817 SMC3YJL074C 3693 nt2.89□□□□□ -1.95
CUP9P41817 TRM13YOL125W 1431 nt2.89□□□□□ -1.95
CUP9P41817 SMP3YOR149C 1551 nt2.89□□□□□ -1.95
CUP9P41817 YBR255C-AYBR255C-A 363 nt2.89□□□□□ -1.95
CUP9P41817 BYE1YKL005C 1785 nt2.89□□□□□ -1.95
CUP9P41817 GPI1YGR216C 1830 nt2.89□□□□□ -1.95
CUP9P41817 YPR022CYPR022C 3402 nt2.89□□□□□ -1.95
CUP9P41817 CTR86YCR054C 1692 nt2.88□□□□□ -1.95
CUP9P41817 GCN1YGL195W 8019 nt2.88□□□□□ -1.95
CUP9P41817 FLO9YAL063C 3969 nt2.88□□□□□ -1.95
CUP9P41817 IMG2YCR071C 441 nt2.88□□□□□ -1.95
CUP9P41817 VFA1YER128W 612 nt2.88□□□□□ -1.95
CUP9P41817 PAN5YHR063C 1140 nt2.88□□□□□ -1.95
CUP9P41817 MBB1YJL199C 327 nt2.88□□□□□ -1.95
CUP9P41817 HTA2YBL003C 399 nt2.88□□□□□ -1.95
CUP9P41817 YIL082W-AYIL082W-A 4497 nt2.88□□□□□ -1.95
CUP9P41817 RPN2YIL075C 2838 nt2.87□□□□□ -1.95
CUP9P41817 TGL3YMR313C 1929 nt2.87□□□□□ -1.95
CUP9P41817 FLO5YHR211W 3228 nt2.87□□□□□ -1.95
CUP9P41817 SUC2YIL162W 1599 nt2.87□□□□□ -1.95
CUP9P41817 WHI4YDL224C 1950 nt2.87□□□□□ -1.95
CUP9P41817 TSR1YDL060W 2367 nt2.87□□□□□ -1.95
CUP9P41817 COS7YDL248W 1152 nt2.87□□□□□ -1.95
CUP9P41817 MAF1YDR005C 1188 nt2.87□□□□□ -1.95
CUP9P41817 TRP4YDR354W 1143 nt2.87□□□□□ -1.95
CUP9P41817 COS5YJR161C 1152 nt2.87□□□□□ -1.95
CUP9P41817 YKR047WYKR047W 306 nt2.87□□□□□ -1.95
CUP9P41817 COA4YLR218C 453 nt2.87□□□□□ -1.95
CUP9P41817 YNL067W-AYNL067W-A 147 nt2.87□□□□□ -1.95
CUP9P41817 GIS2YNL255C 462 nt2.87□□□□□ -1.95
CUP9P41817 YPR015CYPR015C 744 nt2.87□□□□□ -1.95
CUP9P41817 CNA1YLR433C 1662 nt2.87□□□□□ -1.95
CUP9P41817 POL3YDL102W 3294 nt2.87□□□□□ -1.95
CUP9P41817 SQS1YNL224C 2304 nt2.87□□□□□ -1.95
CUP9P41817 SLI1YGR212W 1407 nt2.86□□□□□ -1.95
CUP9P41817 YMR317WYMR317W 3423 nt2.86□□□□□ -1.95
CUP9P41817 YIL092WYIL092W 1902 nt2.86□□□□□ -1.95
CUP9P41817 YEL025CYEL025C 3567 nt2.86□□□□□ -1.95
CUP9P41817 ECO1YFR027W 846 nt2.86□□□□□ -1.95
CUP9P41817 COS12YGL263W 1143 nt2.86□□□□□ -1.95
CUP9P41817 YGR107WYGR107W 450 nt2.86□□□□□ -1.95
CUP9P41817 TVP18YMR071C 504 nt2.86□□□□□ -1.95
Retrieved 100 of 7,029 protein–RNA pairs in 16.4 ms