Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 YBL039W-BYBL039W-B 180 nt3.9□□□□□ -1.79
RTR1P40084 YMR294W-AYMR294W-A 360 nt3.9□□□□□ -1.79
RTR1P40084 VAS1YGR094W 3315 nt3.9□□□□□ -1.79
RTR1P40084 POL1YNL102W 4407 nt3.89□□□□□ -1.79
RTR1P40084 FAA2YER015W 2235 nt3.89□□□□□ -1.79
RTR1P40084 SIZ1YDR409W 2715 nt3.89□□□□□ -1.79
RTR1P40084 YRB30YGL164C 1323 nt3.89□□□□□ -1.79
RTR1P40084 TSR1YDL060W 2367 nt3.89□□□□□ -1.79
RTR1P40084 PUF2YPR042C 3228 nt3.88□□□□□ -1.79
RTR1P40084 ATG21YPL100W 1491 nt3.88□□□□□ -1.79
RTR1P40084 YDR250CYDR250C 276 nt3.88□□□□□ -1.79
RTR1P40084 SPT4YGR063C 309 nt3.88□□□□□ -1.79
RTR1P40084 APC9YLR102C 798 nt3.88□□□□□ -1.79
RTR1P40084 PSF3YOL146W 585 nt3.88□□□□□ -1.79
RTR1P40084 IDH2YOR136W 1110 nt3.88□□□□□ -1.79
RTR1P40084 YBR141W-AYBR141W-A 96 nt3.88□□□□□ -1.79
RTR1P40084 IMD4YML056C 1575 nt3.88□□□□□ -1.79
RTR1P40084 STU1YBL034C 4542 nt3.88□□□□□ -1.79
RTR1P40084 FKH1YIL131C 1455 nt3.87□□□□□ -1.79
RTR1P40084 PEP7YDR323C 1548 nt3.87□□□□□ -1.79
RTR1P40084 YRM1YOR172W 2361 nt3.87□□□□□ -1.79
RTR1P40084 COS8YHL048W 1146 nt3.87□□□□□ -1.79
RTR1P40084 MTD1YKR080W 963 nt3.87□□□□□ -1.79
RTR1P40084 YLR012CYLR012C 300 nt3.87□□□□□ -1.79
RTR1P40084 OXR1YPL196W 822 nt3.87□□□□□ -1.79
RTR1P40084 BMS1YPL217C 3552 nt3.87□□□□□ -1.79
RTR1P40084 SLI1YGR212W 1407 nt3.87□□□□□ -1.79
RTR1P40084 KIP3YGL216W 2418 nt3.86□□□□□ -1.79
RTR1P40084 IOC2YLR095C 2439 nt3.86□□□□□ -1.79
RTR1P40084 JIP5YPR169W 1479 nt3.86□□□□□ -1.79
RTR1P40084 DSF2YBR007C 2211 nt3.86□□□□□ -1.79
RTR1P40084 XRS2YDR369C 2565 nt3.86□□□□□ -1.79
RTR1P40084 PPH3YDR075W 927 nt3.86□□□□□ -1.79
RTR1P40084 YEL028WYEL028W 462 nt3.86□□□□□ -1.79
RTR1P40084 FMP10YER182W 735 nt3.86□□□□□ -1.79
RTR1P40084 DSD1YGL196W 1287 nt3.86□□□□□ -1.79
RTR1P40084 YGR018CYGR018C 330 nt3.86□□□□□ -1.79
RTR1P40084 YLR156WYLR156W 345 nt3.86□□□□□ -1.79
RTR1P40084 YLR159WYLR159W 345 nt3.86□□□□□ -1.79
RTR1P40084 YLR161WYLR161W 345 nt3.86□□□□□ -1.79
RTR1P40084 FOL3YMR113W 1284 nt3.86□□□□□ -1.79
RTR1P40084 ARO4YBR249C 1113 nt3.86□□□□□ -1.79
RTR1P40084 YOR296WYOR296W 3870 nt3.86□□□□□ -1.79
RTR1P40084 SEA4YBL104C 3117 nt3.86□□□□□ -1.79
RTR1P40084 SIR1YKR101W 1965 nt3.85□□□□□ -1.79
RTR1P40084 NOP6YDL213C 678 nt3.85□□□□□ -1.79
RTR1P40084 RPS13YDR064W 456 nt3.85□□□□□ -1.79
RTR1P40084 CAP2YIL034C 864 nt3.85□□□□□ -1.79
RTR1P40084 IRC18YJL037W 675 nt3.85□□□□□ -1.79
RTR1P40084 UPS2YLR168C 693 nt3.85□□□□□ -1.79
RTR1P40084 SNO1YMR095C 675 nt3.85□□□□□ -1.79
RTR1P40084 CAT5YOR125C 702 nt3.85□□□□□ -1.79
RTR1P40084 POC4YPL144W 447 nt3.85□□□□□ -1.79
RTR1P40084 CMR3YPR013C 954 nt3.85□□□□□ -1.79
RTR1P40084 PTM1YKL039W 1572 nt3.85□□□□□ -1.79
RTR1P40084 TCM62YBR044C 1719 nt3.84□□□□□ -1.79
RTR1P40084 RPC37YKR025W 849 nt3.84□□□□□ -1.79
RTR1P40084 YML053CYML053C 639 nt3.84□□□□□ -1.79
RTR1P40084 TEM1YML064C 738 nt3.84□□□□□ -1.79
RTR1P40084 ARG80YMR042W 534 nt3.84□□□□□ -1.79
RTR1P40084 NMD2YHR077C 3270 nt3.84□□□□□ -1.79
RTR1P40084 MDM1YML104C 3384 nt3.84□□□□□ -1.79
RTR1P40084 APL4YPR029C 2499 nt3.84□□□□□ -1.8
RTR1P40084 CHS2YBR038W 2892 nt3.83□□□□□ -1.8
RTR1P40084 YIL175WYIL175W 318 nt3.83□□□□□ -1.8
RTR1P40084 GCD14YJL125C 1152 nt3.83□□□□□ -1.8
RTR1P40084 YJL222W-BYJL222W-B 138 nt3.83□□□□□ -1.8
RTR1P40084 PIR1YKL164C 1026 nt3.83□□□□□ -1.8
RTR1P40084 RIM9YMR063W 720 nt3.83□□□□□ -1.8
RTR1P40084 YDL180WYDL180W 1644 nt3.83□□□□□ -1.8
RTR1P40084 HEH2YDR458C 1992 nt3.83□□□□□ -1.8
RTR1P40084 PAM1YDR251W 2493 nt3.83□□□□□ -1.8
RTR1P40084 POL3YDL102W 3294 nt3.82□□□□□ -1.8
RTR1P40084 PRM2YIL037C 1971 nt3.82□□□□□ -1.8
RTR1P40084 TAF6YGL112C 1551 nt3.82□□□□□ -1.8
RTR1P40084 NAM9YNL137C 1461 nt3.82□□□□□ -1.8
RTR1P40084 TIM21YGR033C 720 nt3.82□□□□□ -1.8
RTR1P40084 PET54YGR222W 882 nt3.82□□□□□ -1.8
RTR1P40084 RPL17AYKL180W 555 nt3.82□□□□□ -1.8
RTR1P40084 PSR1YLL010C 1284 nt3.82□□□□□ -1.8
RTR1P40084 WHI4YDL224C 1950 nt3.82□□□□□ -1.8
RTR1P40084 RGC1YPR115W 3252 nt3.82□□□□□ -1.8
RTR1P40084 MDM38YOL027C 1722 nt3.81□□□□□ -1.8
RTR1P40084 NKP1YDR383C 717 nt3.81□□□□□ -1.8
RTR1P40084 COX2Q0250 756 nt3.81□□□□□ -1.8
RTR1P40084 THP2YHR167W 786 nt3.81□□□□□ -1.8
RTR1P40084 PRX1YBL064C 786 nt3.81□□□□□ -1.8
RTR1P40084 VPS17YOR132W 1656 nt3.81□□□□□ -1.8
RTR1P40084 YKL222CYKL222C 2118 nt3.8□□□□□ -1.8
RTR1P40084 DRS2YAL026C 4068 nt3.8□□□□□ -1.8
RTR1P40084 KRE5YOR336W 4098 nt3.8□□□□□ -1.8
RTR1P40084 YFL051CYFL051C 483 nt3.8□□□□□ -1.8
RTR1P40084 YFL065CYFL065C 309 nt3.8□□□□□ -1.8
RTR1P40084 RTA1YGR213C 954 nt3.8□□□□□ -1.8
RTR1P40084 RSM25YIL093C 795 nt3.8□□□□□ -1.8
RTR1P40084 MBB1YJL199C 327 nt3.8□□□□□ -1.8
RTR1P40084 RPL15AYLR029C 615 nt3.8□□□□□ -1.8
RTR1P40084 VPS71YML041C 843 nt3.8□□□□□ -1.8
RTR1P40084 JJJ1YNL227C 1773 nt3.8□□□□□ -1.8
RTR1P40084 ENA2YDR039C 3276 nt3.8□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 19.9 ms