Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SCNN1AP37088 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.66■■□□□ 1.22
SCNN1AP37088 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC22.66■■□□□ 1.22
SCNN1AP37088 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
SCNN1AP37088 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC22.66■■□□□ 1.22
SCNN1AP37088 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SCNN1AP37088 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22.66■■□□□ 1.22
SCNN1AP37088 SMUG1P1-201ENST00000590640 811 ntBASIC22.66■■□□□ 1.22
SCNN1AP37088 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SCNN1AP37088 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SCNN1AP37088 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.66■■□□□ 1.22
SCNN1AP37088 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC22.65■■□□□ 1.22
SCNN1AP37088 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SCNN1AP37088 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SCNN1AP37088 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
SCNN1AP37088 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SCNN1AP37088 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC22.65■■□□□ 1.22
SCNN1AP37088 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22.65■■□□□ 1.22
SCNN1AP37088 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC22.65■■□□□ 1.22
SCNN1AP37088 AL034346.1-201ENST00000568244 1277 ntBASIC22.65■■□□□ 1.22
SCNN1AP37088 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SCNN1AP37088 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SCNN1AP37088 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SCNN1AP37088 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SCNN1AP37088 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SCNN1AP37088 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SCNN1AP37088 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.64■■□□□ 1.22
SCNN1AP37088 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SCNN1AP37088 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SCNN1AP37088 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
SCNN1AP37088 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SCNN1AP37088 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SCNN1AP37088 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SCNN1AP37088 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SCNN1AP37088 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.64■■□□□ 1.21
SCNN1AP37088 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC22.64■■□□□ 1.21
SCNN1AP37088 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
SCNN1AP37088 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SCNN1AP37088 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SCNN1AP37088 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
SCNN1AP37088 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SCNN1AP37088 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SCNN1AP37088 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SCNN1AP37088 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SCNN1AP37088 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC22.63■■□□□ 1.21
SCNN1AP37088 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SCNN1AP37088 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SCNN1AP37088 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SCNN1AP37088 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC22.62■■□□□ 1.21
SCNN1AP37088 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SCNN1AP37088 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SCNN1AP37088 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SCNN1AP37088 MTURN-203ENST00000409688 843 ntTSL 2 BASIC22.62■■□□□ 1.21
SCNN1AP37088 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.62■■□□□ 1.21
SCNN1AP37088 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC22.62■■□□□ 1.21
SCNN1AP37088 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SCNN1AP37088 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC22.62■■□□□ 1.21
SCNN1AP37088 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
SCNN1AP37088 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SCNN1AP37088 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
SCNN1AP37088 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SCNN1AP37088 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
SCNN1AP37088 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
SCNN1AP37088 HYI-206ENST00000372434 1025 ntTSL 5 BASIC22.61■■□□□ 1.21
SCNN1AP37088 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SCNN1AP37088 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
SCNN1AP37088 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
SCNN1AP37088 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC22.61■■□□□ 1.21
SCNN1AP37088 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC22.61■■□□□ 1.21
SCNN1AP37088 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.61■■□□□ 1.21
SCNN1AP37088 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.61■■□□□ 1.21
SCNN1AP37088 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SCNN1AP37088 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC22.61■■□□□ 1.21
SCNN1AP37088 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SCNN1AP37088 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SCNN1AP37088 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SCNN1AP37088 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SCNN1AP37088 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SCNN1AP37088 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
SCNN1AP37088 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC22.6■■□□□ 1.21
SCNN1AP37088 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC22.6■■□□□ 1.21
SCNN1AP37088 AC105233.4-201ENST00000642045 216 ntBASIC22.6■■□□□ 1.21
SCNN1AP37088 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.6■■□□□ 1.21
SCNN1AP37088 C11orf96-202ENST00000528572 1834 ntBASIC22.59■■□□□ 1.21
SCNN1AP37088 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
SCNN1AP37088 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SCNN1AP37088 MFF-208ENST00000409616 1247 ntTSL 5 BASIC22.59■■□□□ 1.21
SCNN1AP37088 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SCNN1AP37088 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SCNN1AP37088 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SCNN1AP37088 EP400NL-214ENST00000641289 2402 ntBASIC22.59■■□□□ 1.21
SCNN1AP37088 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SCNN1AP37088 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC22.59■■□□□ 1.21
SCNN1AP37088 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SCNN1AP37088 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SCNN1AP37088 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SCNN1AP37088 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC22.58■■□□□ 1.21
SCNN1AP37088 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SCNN1AP37088 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.58■■□□□ 1.21
SCNN1AP37088 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.58■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms