Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.62■□□□□ 0.89
RORAP35398 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.62■□□□□ 0.89
RORAP35398 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RORAP35398 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.62■□□□□ 0.89
RORAP35398 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.61■□□□□ 0.89
RORAP35398 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.61■□□□□ 0.89
RORAP35398 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RORAP35398 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
RORAP35398 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.61■□□□□ 0.89
RORAP35398 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.61■□□□□ 0.89
RORAP35398 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.61■□□□□ 0.89
RORAP35398 KRT18P61-201ENST00000585825 1298 ntBASIC20.61■□□□□ 0.89
RORAP35398 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.61■□□□□ 0.89
RORAP35398 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
RORAP35398 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
RORAP35398 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.61■□□□□ 0.89
RORAP35398 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RORAP35398 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
RORAP35398 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.6■□□□□ 0.89
RORAP35398 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RORAP35398 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RORAP35398 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RORAP35398 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RORAP35398 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
RORAP35398 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
RORAP35398 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RORAP35398 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RORAP35398 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RORAP35398 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.59■□□□□ 0.89
RORAP35398 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
RORAP35398 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
RORAP35398 RARRES2P11-201ENST00000635158 484 ntBASIC20.59■□□□□ 0.89
RORAP35398 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RORAP35398 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.59■□□□□ 0.89
RORAP35398 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.59■□□□□ 0.89
RORAP35398 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RORAP35398 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
RORAP35398 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RORAP35398 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RORAP35398 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.58■□□□□ 0.89
RORAP35398 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RORAP35398 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RORAP35398 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RORAP35398 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
RORAP35398 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RORAP35398 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RORAP35398 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RORAP35398 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.57■□□□□ 0.88
RORAP35398 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RORAP35398 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.57■□□□□ 0.88
RORAP35398 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
RORAP35398 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.57■□□□□ 0.88
RORAP35398 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RORAP35398 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RORAP35398 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.57■□□□□ 0.88
RORAP35398 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
RORAP35398 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
RORAP35398 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RORAP35398 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.56■□□□□ 0.88
RORAP35398 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RORAP35398 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.56■□□□□ 0.88
RORAP35398 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RORAP35398 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.56■□□□□ 0.88
RORAP35398 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.56■□□□□ 0.88
RORAP35398 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.56■□□□□ 0.88
RORAP35398 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.56■□□□□ 0.88
RORAP35398 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
RORAP35398 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RORAP35398 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RORAP35398 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
RORAP35398 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RORAP35398 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RORAP35398 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RORAP35398 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.55■□□□□ 0.88
RORAP35398 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RORAP35398 AC090192.1-201ENST00000517740 490 ntBASIC20.55■□□□□ 0.88
RORAP35398 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
RORAP35398 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.55■□□□□ 0.88
RORAP35398 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RORAP35398 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.55■□□□□ 0.88
RORAP35398 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.55■□□□□ 0.88
RORAP35398 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.54■□□□□ 0.88
RORAP35398 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RORAP35398 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RORAP35398 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RORAP35398 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RORAP35398 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RORAP35398 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RORAP35398 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
RORAP35398 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.54■□□□□ 0.88
RORAP35398 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RORAP35398 AC004911.1-201ENST00000416316 871 ntBASIC20.54■□□□□ 0.88
RORAP35398 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.54■□□□□ 0.88
RORAP35398 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.54■□□□□ 0.88
RORAP35398 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.54■□□□□ 0.88
RORAP35398 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.54■□□□□ 0.88
RORAP35398 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RORAP35398 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.54■□□□□ 0.88
RORAP35398 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.54■□□□□ 0.88
RORAP35398 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms