Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC242852.2-201ENST00000615738 1807 ntBASIC19.82■□□□□ 0.76
SHC1P29353 SUDS3P1-201ENST00000505831 966 ntBASIC19.82■□□□□ 0.76
SHC1P29353 AC008764.7-201ENST00000593779 1081 ntBASIC19.82■□□□□ 0.76
SHC1P29353 AL355001.2-201ENST00000620617 1191 ntBASIC19.82■□□□□ 0.76
SHC1P29353 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SHC1P29353 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SHC1P29353 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SHC1P29353 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SHC1P29353 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SHC1P29353 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SHC1P29353 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SHC1P29353 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SHC1P29353 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.81■□□□□ 0.76
SHC1P29353 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.81■□□□□ 0.76
SHC1P29353 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SHC1P29353 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.81■□□□□ 0.76
SHC1P29353 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
SHC1P29353 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SHC1P29353 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SHC1P29353 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SHC1P29353 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SHC1P29353 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
SHC1P29353 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
SHC1P29353 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SHC1P29353 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SHC1P29353 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SHC1P29353 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
SHC1P29353 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SHC1P29353 MIR939-201ENST00000401314 82 ntBASIC19.8■□□□□ 0.76
SHC1P29353 BX842568.3-201ENST00000418104 571 ntBASIC19.8■□□□□ 0.76
SHC1P29353 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SHC1P29353 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SHC1P29353 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.8■□□□□ 0.76
SHC1P29353 AL136967.2-201ENST00000623968 743 ntBASIC19.8■□□□□ 0.76
SHC1P29353 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.8■□□□□ 0.76
SHC1P29353 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.8■□□□□ 0.76
SHC1P29353 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SHC1P29353 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SHC1P29353 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.79■□□□□ 0.76
SHC1P29353 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SHC1P29353 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SHC1P29353 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SHC1P29353 AL024507.2-201ENST00000606070 2574 ntBASIC19.79■□□□□ 0.76
SHC1P29353 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SHC1P29353 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SHC1P29353 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SHC1P29353 AC099791.1-201ENST00000416440 715 ntBASIC19.79■□□□□ 0.76
SHC1P29353 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.79■□□□□ 0.76
SHC1P29353 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SHC1P29353 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SHC1P29353 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.79■□□□□ 0.76
SHC1P29353 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
SHC1P29353 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SHC1P29353 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SHC1P29353 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
SHC1P29353 AL137060.1-201ENST00000618151 2648 ntBASIC19.78■□□□□ 0.76
SHC1P29353 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHC1P29353 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SHC1P29353 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.78■□□□□ 0.76
SHC1P29353 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHC1P29353 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
SHC1P29353 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.78■□□□□ 0.76
SHC1P29353 AC142381.2-201ENST00000566120 298 ntBASIC19.78■□□□□ 0.76
SHC1P29353 AC233992.3-201ENST00000607491 485 ntBASIC19.78■□□□□ 0.76
SHC1P29353 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SHC1P29353 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHC1P29353 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.78■□□□□ 0.76
SHC1P29353 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.78■□□□□ 0.76
SHC1P29353 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHC1P29353 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHC1P29353 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.78■□□□□ 0.76
SHC1P29353 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.78■□□□□ 0.76
SHC1P29353 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.78■□□□□ 0.76
SHC1P29353 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHC1P29353 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.77■□□□□ 0.76
SHC1P29353 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SHC1P29353 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
SHC1P29353 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHC1P29353 ESRRAP2-201ENST00000418437 1549 ntBASIC19.77■□□□□ 0.76
SHC1P29353 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.77■□□□□ 0.76
SHC1P29353 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHC1P29353 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.77■□□□□ 0.76
SHC1P29353 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
SHC1P29353 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHC1P29353 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SHC1P29353 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHC1P29353 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SHC1P29353 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHC1P29353 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHC1P29353 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SHC1P29353 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHC1P29353 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHC1P29353 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHC1P29353 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.76■□□□□ 0.75
SHC1P29353 AC027682.1-201ENST00000562846 899 ntBASIC19.76■□□□□ 0.75
SHC1P29353 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SHC1P29353 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SHC1P29353 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.76■□□□□ 0.75
SHC1P29353 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHC1P29353 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms