Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 UBE2DNL-204ENST00000602536 740 ntBASIC24.7■■□□□ 1.54
HOXC6P09630 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
HOXC6P09630 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
HOXC6P09630 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
HOXC6P09630 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
HOXC6P09630 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
HOXC6P09630 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
HOXC6P09630 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC24.69■■□□□ 1.54
HOXC6P09630 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
HOXC6P09630 PARP1-202ENST00000366792 553 ntTSL 3 BASIC24.69■■□□□ 1.54
HOXC6P09630 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC24.69■■□□□ 1.54
HOXC6P09630 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC24.69■■□□□ 1.54
HOXC6P09630 AC005181.1-201ENST00000604782 1256 ntBASIC24.69■■□□□ 1.54
HOXC6P09630 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
HOXC6P09630 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
HOXC6P09630 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
HOXC6P09630 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
HOXC6P09630 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC24.68■■□□□ 1.54
HOXC6P09630 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
HOXC6P09630 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC24.68■■□□□ 1.54
HOXC6P09630 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
HOXC6P09630 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
HOXC6P09630 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
HOXC6P09630 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC24.68■■□□□ 1.54
HOXC6P09630 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
HOXC6P09630 KRT18P6-201ENST00000555540 1265 ntBASIC24.68■■□□□ 1.54
HOXC6P09630 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
HOXC6P09630 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC24.68■■□□□ 1.54
HOXC6P09630 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
HOXC6P09630 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC24.67■■□□□ 1.54
HOXC6P09630 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
HOXC6P09630 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
HOXC6P09630 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC24.67■■□□□ 1.54
HOXC6P09630 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.67■■□□□ 1.54
HOXC6P09630 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
HOXC6P09630 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
HOXC6P09630 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
HOXC6P09630 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
HOXC6P09630 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
HOXC6P09630 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC24.67■■□□□ 1.54
HOXC6P09630 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC24.67■■□□□ 1.54
HOXC6P09630 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC24.67■■□□□ 1.54
HOXC6P09630 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC24.67■■□□□ 1.54
HOXC6P09630 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
HOXC6P09630 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
HOXC6P09630 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
HOXC6P09630 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
HOXC6P09630 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
HOXC6P09630 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
HOXC6P09630 TSPY20P-201ENST00000450910 630 ntBASIC24.66■■□□□ 1.54
HOXC6P09630 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
HOXC6P09630 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC24.66■■□□□ 1.54
HOXC6P09630 MYCNOS-205ENST00000641950 531 ntBASIC24.66■■□□□ 1.54
HOXC6P09630 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
HOXC6P09630 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
HOXC6P09630 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC24.65■■□□□ 1.54
HOXC6P09630 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC24.65■■□□□ 1.54
HOXC6P09630 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC24.65■■□□□ 1.54
HOXC6P09630 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC24.65■■□□□ 1.54
HOXC6P09630 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC24.65■■□□□ 1.54
HOXC6P09630 AP001160.3-201ENST00000601484 763 ntBASIC24.65■■□□□ 1.54
HOXC6P09630 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
HOXC6P09630 MFF-207ENST00000409565 1548 ntTSL 2 BASIC24.65■■□□□ 1.54
HOXC6P09630 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
HOXC6P09630 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
HOXC6P09630 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
HOXC6P09630 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
HOXC6P09630 KLF13-207ENST00000560473 489 ntTSL 3 BASIC24.64■■□□□ 1.54
HOXC6P09630 AL138781.1-201ENST00000566567 1274 ntBASIC24.64■■□□□ 1.54
HOXC6P09630 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
HOXC6P09630 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
HOXC6P09630 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
HOXC6P09630 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
HOXC6P09630 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC24.63■■□□□ 1.53
HOXC6P09630 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.63■■□□□ 1.53
HOXC6P09630 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
HOXC6P09630 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
HOXC6P09630 BRI3-207ENST00000539286 699 ntTSL 2 BASIC24.63■■□□□ 1.53
HOXC6P09630 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC24.63■■□□□ 1.53
HOXC6P09630 AC055733.4-201ENST00000638462 1354 ntBASIC24.63■■□□□ 1.53
HOXC6P09630 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC24.63■■□□□ 1.53
HOXC6P09630 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC24.63■■□□□ 1.53
HOXC6P09630 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
HOXC6P09630 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
HOXC6P09630 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
HOXC6P09630 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
HOXC6P09630 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC24.62■■□□□ 1.53
HOXC6P09630 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC24.62■■□□□ 1.53
HOXC6P09630 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
HOXC6P09630 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
HOXC6P09630 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
HOXC6P09630 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC24.61■■□□□ 1.53
HOXC6P09630 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC24.61■■□□□ 1.53
HOXC6P09630 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
HOXC6P09630 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
HOXC6P09630 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
HOXC6P09630 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
HOXC6P09630 AC073210.2-201ENST00000430369 194 ntBASIC24.61■■□□□ 1.53
HOXC6P09630 CNN2P6-201ENST00000439038 900 ntBASIC24.61■■□□□ 1.53
HOXC6P09630 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms