Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
CHRNA1P02708 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CHRNA1P02708 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHRNA1P02708 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
CHRNA1P02708 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHRNA1P02708 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHRNA1P02708 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC23.79■■□□□ 1.4
CHRNA1P02708 AC006970.2-201ENST00000450065 779 ntBASIC23.79■■□□□ 1.4
CHRNA1P02708 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC23.79■■□□□ 1.4
CHRNA1P02708 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHRNA1P02708 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHRNA1P02708 KRT87P-202ENST00000534226 1464 ntBASIC23.79■■□□□ 1.4
CHRNA1P02708 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHRNA1P02708 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC23.79■■□□□ 1.4
CHRNA1P02708 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHRNA1P02708 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHRNA1P02708 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHRNA1P02708 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23.78■■□□□ 1.4
CHRNA1P02708 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHRNA1P02708 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CHRNA1P02708 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
CHRNA1P02708 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHRNA1P02708 NCF1B-203ENST00000435988 1254 ntBASIC23.77■■□□□ 1.4
CHRNA1P02708 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC23.77■■□□□ 1.4
CHRNA1P02708 MFSD11-216ENST00000590393 1141 ntBASIC23.77■■□□□ 1.4
CHRNA1P02708 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHRNA1P02708 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
CHRNA1P02708 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
CHRNA1P02708 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
CHRNA1P02708 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC23.76■■□□□ 1.39
CHRNA1P02708 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHRNA1P02708 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CHRNA1P02708 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CHRNA1P02708 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC23.76■■□□□ 1.39
CHRNA1P02708 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC23.76■■□□□ 1.39
CHRNA1P02708 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CHRNA1P02708 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC23.76■■□□□ 1.39
CHRNA1P02708 DUSP8P5-201ENST00000422884 1815 ntBASIC23.75■■□□□ 1.39
CHRNA1P02708 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHRNA1P02708 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHRNA1P02708 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHRNA1P02708 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC23.75■■□□□ 1.39
CHRNA1P02708 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC23.75■■□□□ 1.39
CHRNA1P02708 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHRNA1P02708 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.75■■□□□ 1.39
CHRNA1P02708 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHRNA1P02708 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CHRNA1P02708 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC23.75■■□□□ 1.39
CHRNA1P02708 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.75■■□□□ 1.39
CHRNA1P02708 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC23.75■■□□□ 1.39
CHRNA1P02708 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CHRNA1P02708 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CHRNA1P02708 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.74■■□□□ 1.39
CHRNA1P02708 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC23.74■■□□□ 1.39
CHRNA1P02708 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CHRNA1P02708 MIR663A-201ENST00000385250 93 ntBASIC23.74■■□□□ 1.39
CHRNA1P02708 AC079089.2-201ENST00000531211 1277 ntBASIC23.74■■□□□ 1.39
CHRNA1P02708 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC23.74■■□□□ 1.39
CHRNA1P02708 AL109923.1-201ENST00000618799 583 ntBASIC23.74■■□□□ 1.39
CHRNA1P02708 LINC01960-201ENST00000563759 1884 ntBASIC23.74■■□□□ 1.39
CHRNA1P02708 AC055733.4-201ENST00000638462 1354 ntBASIC23.74■■□□□ 1.39
CHRNA1P02708 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CHRNA1P02708 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.73■■□□□ 1.39
CHRNA1P02708 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.73■■□□□ 1.39
CHRNA1P02708 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC23.73■■□□□ 1.39
CHRNA1P02708 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC23.73■■□□□ 1.39
CHRNA1P02708 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC23.73■■□□□ 1.39
CHRNA1P02708 MDK-213ENST00000617138 635 ntTSL 2 BASIC23.73■■□□□ 1.39
CHRNA1P02708 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CHRNA1P02708 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CHRNA1P02708 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CHRNA1P02708 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CHRNA1P02708 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
CHRNA1P02708 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CHRNA1P02708 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC23.72■■□□□ 1.39
CHRNA1P02708 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
CHRNA1P02708 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC23.72■■□□□ 1.39
CHRNA1P02708 WT1-AS_3.1-201ENST00000613262 234 ntBASIC23.72■■□□□ 1.39
CHRNA1P02708 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
CHRNA1P02708 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CHRNA1P02708 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CHRNA1P02708 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CHRNA1P02708 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
CHRNA1P02708 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC23.71■■□□□ 1.39
CHRNA1P02708 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CHRNA1P02708 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.71■■□□□ 1.39
CHRNA1P02708 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
CHRNA1P02708 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC23.7■■□□□ 1.38
CHRNA1P02708 MFF-207ENST00000409565 1548 ntTSL 2 BASIC23.7■■□□□ 1.38
CHRNA1P02708 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
CHRNA1P02708 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
CHRNA1P02708 UBE2DNL-204ENST00000602536 740 ntBASIC23.7■■□□□ 1.38
CHRNA1P02708 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.7■■□□□ 1.38
CHRNA1P02708 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.7■■□□□ 1.38
CHRNA1P02708 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CHRNA1P02708 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
CHRNA1P02708 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
CHRNA1P02708 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CHRNA1P02708 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CHRNA1P02708 AL355802.2-201ENST00000402069 882 ntBASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms