Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TcraP01849 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
TcraP01849 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TcraP01849 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TcraP01849 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TcraP01849 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TcraP01849 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TcraP01849 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TcraP01849 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TcraP01849 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TcraP01849 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TcraP01849 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TcraP01849 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
TcraP01849 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TcraP01849 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TcraP01849 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TcraP01849 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TcraP01849 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TcraP01849 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC13.99□□□□□ -0.17
TcraP01849 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TcraP01849 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TcraP01849 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TcraP01849 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TcraP01849 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TcraP01849 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TcraP01849 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC13.98□□□□□ -0.17
TcraP01849 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TcraP01849 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TcraP01849 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TcraP01849 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TcraP01849 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TcraP01849 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TcraP01849 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TcraP01849 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TcraP01849 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TcraP01849 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TcraP01849 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TcraP01849 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TcraP01849 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TcraP01849 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TcraP01849 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC13.97□□□□□ -0.17
TcraP01849 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC13.97□□□□□ -0.17
TcraP01849 Gm28536-201ENSMUST00000190971 1317 ntBASIC13.97□□□□□ -0.17
TcraP01849 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TcraP01849 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TcraP01849 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TcraP01849 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TcraP01849 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TcraP01849 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TcraP01849 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TcraP01849 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TcraP01849 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TcraP01849 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TcraP01849 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TcraP01849 Gm35558-201ENSMUST00000222675 2219 ntBASIC13.96□□□□□ -0.17
TcraP01849 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC13.96□□□□□ -0.17
TcraP01849 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TcraP01849 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
TcraP01849 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TcraP01849 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TcraP01849 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TcraP01849 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TcraP01849 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TcraP01849 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TcraP01849 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TcraP01849 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TcraP01849 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TcraP01849 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TcraP01849 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TcraP01849 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TcraP01849 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TcraP01849 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TcraP01849 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TcraP01849 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
TcraP01849 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TcraP01849 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
TcraP01849 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
TcraP01849 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TcraP01849 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TcraP01849 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TcraP01849 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TcraP01849 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TcraP01849 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TcraP01849 Gm6627-201ENSMUST00000218299 2386 ntBASIC13.95□□□□□ -0.18
TcraP01849 Gm42900-201ENSMUST00000197184 2167 ntBASIC13.95□□□□□ -0.18
TcraP01849 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TcraP01849 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TcraP01849 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TcraP01849 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TcraP01849 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TcraP01849 Nsd1-203ENSMUST00000224156 1149 ntBASIC13.95□□□□□ -0.18
TcraP01849 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TcraP01849 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TcraP01849 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TcraP01849 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TcraP01849 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TcraP01849 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
TcraP01849 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TcraP01849 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
TcraP01849 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms