Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCNKO75909 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.79■□□□□ 0.6
CCNKO75909 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCNKO75909 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CCNKO75909 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CCNKO75909 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CCNKO75909 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.78■□□□□ 0.6
CCNKO75909 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.78■□□□□ 0.6
CCNKO75909 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCNKO75909 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCNKO75909 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCNKO75909 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CCNKO75909 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCNKO75909 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCNKO75909 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCNKO75909 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCNKO75909 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCNKO75909 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CCNKO75909 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCNKO75909 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCNKO75909 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CCNKO75909 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCNKO75909 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCNKO75909 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCNKO75909 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.77■□□□□ 0.6
CCNKO75909 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.76■□□□□ 0.59
CCNKO75909 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.76■□□□□ 0.59
CCNKO75909 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCNKO75909 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CCNKO75909 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.76■□□□□ 0.59
CCNKO75909 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCNKO75909 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCNKO75909 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CCNKO75909 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCNKO75909 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCNKO75909 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC18.76■□□□□ 0.59
CCNKO75909 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CCNKO75909 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.76■□□□□ 0.59
CCNKO75909 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCNKO75909 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCNKO75909 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCNKO75909 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CCNKO75909 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
CCNKO75909 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCNKO75909 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCNKO75909 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CCNKO75909 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCNKO75909 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC18.75■□□□□ 0.59
CCNKO75909 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.75■□□□□ 0.59
CCNKO75909 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCNKO75909 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCNKO75909 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCNKO75909 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCNKO75909 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCNKO75909 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.74■□□□□ 0.59
CCNKO75909 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCNKO75909 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CCNKO75909 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCNKO75909 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCNKO75909 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.74■□□□□ 0.59
CCNKO75909 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CCNKO75909 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.74■□□□□ 0.59
CCNKO75909 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCNKO75909 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCNKO75909 DUX4L11-201ENST00000611504 1267 ntBASIC18.74■□□□□ 0.59
CCNKO75909 DUX4L12-201ENST00000614593 1267 ntBASIC18.74■□□□□ 0.59
CCNKO75909 DUX4L14-201ENST00000621227 1267 ntBASIC18.74■□□□□ 0.59
CCNKO75909 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CCNKO75909 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCNKO75909 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCNKO75909 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CCNKO75909 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCNKO75909 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCNKO75909 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCNKO75909 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC18.73■□□□□ 0.59
CCNKO75909 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
CCNKO75909 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCNKO75909 HES6-205ENST00000409356 528 ntTSL 2 BASIC18.73■□□□□ 0.59
CCNKO75909 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC18.73■□□□□ 0.59
CCNKO75909 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC18.73■□□□□ 0.59
CCNKO75909 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC18.73■□□□□ 0.59
CCNKO75909 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCNKO75909 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCNKO75909 FEM1AP4-201ENST00000443167 1987 ntBASIC18.73■□□□□ 0.59
CCNKO75909 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCNKO75909 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCNKO75909 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCNKO75909 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCNKO75909 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.73■□□□□ 0.59
CCNKO75909 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCNKO75909 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CCNKO75909 FEM1AP1-201ENST00000431297 1995 ntBASIC18.72■□□□□ 0.59
CCNKO75909 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.72■□□□□ 0.59
CCNKO75909 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCNKO75909 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCNKO75909 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCNKO75909 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
CCNKO75909 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCNKO75909 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCNKO75909 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms