Protein–RNA interactions for Protein: O75534

CSDE1, Cold shock domain-containing protein E1, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1O75534 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC23.84■■□□□ 1.41
CSDE1O75534 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC23.84■■□□□ 1.41
CSDE1O75534 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC23.84■■□□□ 1.41
CSDE1O75534 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC23.84■■□□□ 1.41
CSDE1O75534 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC23.84■■□□□ 1.41
CSDE1O75534 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC23.84■■□□□ 1.41
CSDE1O75534 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC23.84■■□□□ 1.41
CSDE1O75534 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CSDE1O75534 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23.84■■□□□ 1.41
CSDE1O75534 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.84■■□□□ 1.41
CSDE1O75534 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.84■■□□□ 1.41
CSDE1O75534 AC004854.2-201ENST00000608450 1441 ntBASIC23.84■■□□□ 1.41
CSDE1O75534 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CSDE1O75534 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CSDE1O75534 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CSDE1O75534 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
CSDE1O75534 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC23.83■■□□□ 1.41
CSDE1O75534 COX20-201ENST00000366528 568 ntTSL 2 BASIC23.83■■□□□ 1.41
CSDE1O75534 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CSDE1O75534 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC23.83■■□□□ 1.41
CSDE1O75534 RARRES2P11-201ENST00000635158 484 ntBASIC23.83■■□□□ 1.41
CSDE1O75534 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.83■■□□□ 1.41
CSDE1O75534 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CSDE1O75534 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CSDE1O75534 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CSDE1O75534 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC23.83■■□□□ 1.4
CSDE1O75534 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
CSDE1O75534 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
CSDE1O75534 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CSDE1O75534 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CSDE1O75534 AP004607.4-201ENST00000530158 1459 ntBASIC23.82■■□□□ 1.4
CSDE1O75534 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CSDE1O75534 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC23.82■■□□□ 1.4
CSDE1O75534 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC23.82■■□□□ 1.4
CSDE1O75534 AC090192.1-201ENST00000517740 490 ntBASIC23.82■■□□□ 1.4
CSDE1O75534 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CSDE1O75534 C9orf163-202ENST00000624034 2573 ntBASIC23.82■■□□□ 1.4
CSDE1O75534 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
CSDE1O75534 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.82■■□□□ 1.4
CSDE1O75534 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC23.82■■□□□ 1.4
CSDE1O75534 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.81■■□□□ 1.4
CSDE1O75534 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.81■■□□□ 1.4
CSDE1O75534 ME3-201ENST00000323418 1068 ntTSL 5 BASIC23.81■■□□□ 1.4
CSDE1O75534 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CSDE1O75534 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CSDE1O75534 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CSDE1O75534 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CSDE1O75534 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CSDE1O75534 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CSDE1O75534 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CSDE1O75534 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
CSDE1O75534 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CSDE1O75534 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CSDE1O75534 DLX3-202ENST00000512495 834 ntTSL 2 BASIC23.8■■□□□ 1.4
CSDE1O75534 GALNS-213ENST00000569433 723 ntTSL 3 BASIC23.8■■□□□ 1.4
CSDE1O75534 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC23.8■■□□□ 1.4
CSDE1O75534 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CSDE1O75534 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.8■■□□□ 1.4
CSDE1O75534 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CSDE1O75534 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
CSDE1O75534 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC23.79■■□□□ 1.4
CSDE1O75534 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CSDE1O75534 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CSDE1O75534 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CSDE1O75534 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CSDE1O75534 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CSDE1O75534 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
CSDE1O75534 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC23.78■■□□□ 1.4
CSDE1O75534 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CSDE1O75534 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC23.78■■□□□ 1.4
CSDE1O75534 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CSDE1O75534 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
CSDE1O75534 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
CSDE1O75534 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CSDE1O75534 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CSDE1O75534 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
CSDE1O75534 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC23.77■■□□□ 1.4
CSDE1O75534 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
CSDE1O75534 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
CSDE1O75534 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CSDE1O75534 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
CSDE1O75534 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC23.77■■□□□ 1.4
CSDE1O75534 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC23.77■■□□□ 1.4
CSDE1O75534 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC23.77■■□□□ 1.4
CSDE1O75534 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CSDE1O75534 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC23.77■■□□□ 1.4
CSDE1O75534 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC23.77■■□□□ 1.4
CSDE1O75534 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
CSDE1O75534 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.77■■□□□ 1.4
CSDE1O75534 DUSP8P5-201ENST00000422884 1815 ntBASIC23.77■■□□□ 1.4
CSDE1O75534 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CSDE1O75534 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CSDE1O75534 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CSDE1O75534 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CSDE1O75534 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CSDE1O75534 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC23.76■■□□□ 1.39
CSDE1O75534 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC23.76■■□□□ 1.39
CSDE1O75534 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC23.76■■□□□ 1.39
CSDE1O75534 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC23.76■■□□□ 1.39
CSDE1O75534 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms