Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NPHS1O60500 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
NPHS1O60500 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NPHS1O60500 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NPHS1O60500 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.15■□□□□ 0.98
NPHS1O60500 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
NPHS1O60500 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
NPHS1O60500 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NPHS1O60500 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
NPHS1O60500 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NPHS1O60500 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
NPHS1O60500 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NPHS1O60500 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NPHS1O60500 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NPHS1O60500 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
NPHS1O60500 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.14■□□□□ 0.97
NPHS1O60500 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.14■□□□□ 0.97
NPHS1O60500 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
NPHS1O60500 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NPHS1O60500 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NPHS1O60500 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NPHS1O60500 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.14■□□□□ 0.97
NPHS1O60500 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
NPHS1O60500 Z98882.1-201ENST00000622160 2253 ntBASIC21.13■□□□□ 0.97
NPHS1O60500 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NPHS1O60500 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NPHS1O60500 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
NPHS1O60500 PKD1P6-201ENST00000343738 4769 ntBASIC21.13■□□□□ 0.97
NPHS1O60500 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NPHS1O60500 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.13■□□□□ 0.97
NPHS1O60500 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
NPHS1O60500 AC079089.2-201ENST00000531211 1277 ntBASIC21.13■□□□□ 0.97
NPHS1O60500 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.13■□□□□ 0.97
NPHS1O60500 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
NPHS1O60500 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.12■□□□□ 0.97
NPHS1O60500 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
NPHS1O60500 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
NPHS1O60500 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NPHS1O60500 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NPHS1O60500 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NPHS1O60500 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.12■□□□□ 0.97
NPHS1O60500 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
NPHS1O60500 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.12■□□□□ 0.97
NPHS1O60500 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.12■□□□□ 0.97
NPHS1O60500 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
NPHS1O60500 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.12■□□□□ 0.97
NPHS1O60500 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.12■□□□□ 0.97
NPHS1O60500 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NPHS1O60500 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NPHS1O60500 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.11■□□□□ 0.97
NPHS1O60500 TSPY9P-201ENST00000440215 945 ntBASIC21.11■□□□□ 0.97
NPHS1O60500 TSPY11P-201ENST00000442607 1045 ntBASIC21.11■□□□□ 0.97
NPHS1O60500 AC239859.2-201ENST00000444165 318 ntBASIC21.11■□□□□ 0.97
NPHS1O60500 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.11■□□□□ 0.97
NPHS1O60500 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.11■□□□□ 0.97
NPHS1O60500 AL117332.1-201ENST00000622628 974 ntBASIC21.11■□□□□ 0.97
NPHS1O60500 AC241377.3-202ENST00000626088 1088 ntBASIC21.11■□□□□ 0.97
NPHS1O60500 AC241585.3-202ENST00000628937 1088 ntBASIC21.11■□□□□ 0.97
NPHS1O60500 AC245100.8-202ENST00000629247 1058 ntBASIC21.11■□□□□ 0.97
NPHS1O60500 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NPHS1O60500 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NPHS1O60500 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
NPHS1O60500 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NPHS1O60500 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NPHS1O60500 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NPHS1O60500 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
NPHS1O60500 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.1■□□□□ 0.97
NPHS1O60500 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
NPHS1O60500 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NPHS1O60500 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.1■□□□□ 0.97
NPHS1O60500 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
NPHS1O60500 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NPHS1O60500 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NPHS1O60500 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
NPHS1O60500 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NPHS1O60500 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NPHS1O60500 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
NPHS1O60500 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NPHS1O60500 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NPHS1O60500 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
NPHS1O60500 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NPHS1O60500 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NPHS1O60500 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NPHS1O60500 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.1■□□□□ 0.97
NPHS1O60500 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NPHS1O60500 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
NPHS1O60500 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NPHS1O60500 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.09■□□□□ 0.97
NPHS1O60500 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
NPHS1O60500 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.09■□□□□ 0.97
NPHS1O60500 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NPHS1O60500 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
NPHS1O60500 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NPHS1O60500 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
NPHS1O60500 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NPHS1O60500 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NPHS1O60500 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
NPHS1O60500 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NPHS1O60500 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.97
NPHS1O60500 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms