Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 AC012676.1-201ENST00000574705 1949 ntBASIC20.88■□□□□ 0.93
PRICKLE3O43900 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PRICKLE3O43900 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PRICKLE3O43900 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.87■□□□□ 0.93
PRICKLE3O43900 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.87■□□□□ 0.93
PRICKLE3O43900 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRICKLE3O43900 AC027612.3-201ENST00000413684 1047 ntBASIC20.87■□□□□ 0.93
PRICKLE3O43900 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
PRICKLE3O43900 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
PRICKLE3O43900 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRICKLE3O43900 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.87■□□□□ 0.93
PRICKLE3O43900 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PRICKLE3O43900 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.86■□□□□ 0.93
PRICKLE3O43900 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRICKLE3O43900 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRICKLE3O43900 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PRICKLE3O43900 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.86■□□□□ 0.93
PRICKLE3O43900 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRICKLE3O43900 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRICKLE3O43900 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRICKLE3O43900 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
PRICKLE3O43900 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.86■□□□□ 0.93
PRICKLE3O43900 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.86■□□□□ 0.93
PRICKLE3O43900 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRICKLE3O43900 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.86■□□□□ 0.93
PRICKLE3O43900 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.86■□□□□ 0.93
PRICKLE3O43900 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.86■□□□□ 0.93
PRICKLE3O43900 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.86■□□□□ 0.93
PRICKLE3O43900 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PRICKLE3O43900 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.86■□□□□ 0.93
PRICKLE3O43900 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.86■□□□□ 0.93
PRICKLE3O43900 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PRICKLE3O43900 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRICKLE3O43900 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PRICKLE3O43900 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
PRICKLE3O43900 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRICKLE3O43900 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRICKLE3O43900 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRICKLE3O43900 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PRICKLE3O43900 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
PRICKLE3O43900 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRICKLE3O43900 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.85■□□□□ 0.93
PRICKLE3O43900 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.85■□□□□ 0.93
PRICKLE3O43900 MIR6084-201ENST00000622012 110 ntBASIC20.85■□□□□ 0.93
PRICKLE3O43900 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PRICKLE3O43900 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRICKLE3O43900 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
PRICKLE3O43900 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.85■□□□□ 0.93
PRICKLE3O43900 OR7E47P-201ENST00000546390 1422 ntBASIC20.85■□□□□ 0.93
PRICKLE3O43900 AC133561.1-201ENST00000568600 2415 ntBASIC20.85■□□□□ 0.93
PRICKLE3O43900 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRICKLE3O43900 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.85■□□□□ 0.93
PRICKLE3O43900 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRICKLE3O43900 AC233723.2-201ENST00000623798 2106 ntBASIC20.84■□□□□ 0.93
PRICKLE3O43900 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.84■□□□□ 0.93
PRICKLE3O43900 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.84■□□□□ 0.93
PRICKLE3O43900 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRICKLE3O43900 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRICKLE3O43900 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PRICKLE3O43900 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PRICKLE3O43900 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.84■□□□□ 0.93
PRICKLE3O43900 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.84■□□□□ 0.93
PRICKLE3O43900 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRICKLE3O43900 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRICKLE3O43900 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PRICKLE3O43900 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PRICKLE3O43900 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PRICKLE3O43900 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PRICKLE3O43900 AC026271.2-201ENST00000428091 497 ntBASIC20.83■□□□□ 0.93
PRICKLE3O43900 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.83■□□□□ 0.93
PRICKLE3O43900 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
PRICKLE3O43900 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
PRICKLE3O43900 BX005040.4-201ENST00000637145 1518 ntBASIC20.83■□□□□ 0.92
PRICKLE3O43900 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
PRICKLE3O43900 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.83■□□□□ 0.92
PRICKLE3O43900 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRICKLE3O43900 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PRICKLE3O43900 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.82■□□□□ 0.92
PRICKLE3O43900 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRICKLE3O43900 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRICKLE3O43900 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRICKLE3O43900 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRICKLE3O43900 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
PRICKLE3O43900 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.82■□□□□ 0.92
PRICKLE3O43900 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PRICKLE3O43900 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRICKLE3O43900 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.81■□□□□ 0.92
PRICKLE3O43900 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.81■□□□□ 0.92
PRICKLE3O43900 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PRICKLE3O43900 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.81■□□□□ 0.92
PRICKLE3O43900 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.81■□□□□ 0.92
PRICKLE3O43900 TPRG1LP1-201ENST00000598702 760 ntBASIC20.81■□□□□ 0.92
PRICKLE3O43900 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRICKLE3O43900 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PRICKLE3O43900 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PRICKLE3O43900 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRICKLE3O43900 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRICKLE3O43900 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRICKLE3O43900 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.81■□□□□ 0.92
PRICKLE3O43900 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms