Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
PHGDHO43175 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PHGDHO43175 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PHGDHO43175 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PHGDHO43175 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.54■■□□□ 1.04
PHGDHO43175 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.54■■□□□ 1.04
PHGDHO43175 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PHGDHO43175 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.54■■□□□ 1.04
PHGDHO43175 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PHGDHO43175 MIR3621-201ENST00000580529 85 ntBASIC21.54■■□□□ 1.04
PHGDHO43175 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
PHGDHO43175 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PHGDHO43175 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PHGDHO43175 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.54■■□□□ 1.04
PHGDHO43175 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PHGDHO43175 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PHGDHO43175 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.53■■□□□ 1.04
PHGDHO43175 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PHGDHO43175 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PHGDHO43175 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PHGDHO43175 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
PHGDHO43175 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PHGDHO43175 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.53■■□□□ 1.04
PHGDHO43175 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.53■■□□□ 1.04
PHGDHO43175 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.53■■□□□ 1.04
PHGDHO43175 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
PHGDHO43175 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
PHGDHO43175 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.53■■□□□ 1.04
PHGDHO43175 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.53■■□□□ 1.04
PHGDHO43175 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
PHGDHO43175 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
PHGDHO43175 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PHGDHO43175 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
PHGDHO43175 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PHGDHO43175 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PHGDHO43175 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
PHGDHO43175 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.52■■□□□ 1.04
PHGDHO43175 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PHGDHO43175 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PHGDHO43175 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PHGDHO43175 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
PHGDHO43175 AC026310.3-201ENST00000625186 2373 ntBASIC21.52■■□□□ 1.04
PHGDHO43175 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.03
PHGDHO43175 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
PHGDHO43175 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
PHGDHO43175 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
PHGDHO43175 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.51■■□□□ 1.03
PHGDHO43175 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
PHGDHO43175 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.51■■□□□ 1.03
PHGDHO43175 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PHGDHO43175 AL031602.1-201ENST00000633169 911 ntBASIC21.51■■□□□ 1.03
PHGDHO43175 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PHGDHO43175 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.51■■□□□ 1.03
PHGDHO43175 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PHGDHO43175 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.5■■□□□ 1.03
PHGDHO43175 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.5■■□□□ 1.03
PHGDHO43175 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PHGDHO43175 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PHGDHO43175 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PHGDHO43175 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
PHGDHO43175 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PHGDHO43175 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PHGDHO43175 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
PHGDHO43175 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.5■■□□□ 1.03
PHGDHO43175 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.5■■□□□ 1.03
PHGDHO43175 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
PHGDHO43175 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PHGDHO43175 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
PHGDHO43175 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PHGDHO43175 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
PHGDHO43175 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PHGDHO43175 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PHGDHO43175 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PHGDHO43175 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PHGDHO43175 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PHGDHO43175 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PHGDHO43175 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.49■■□□□ 1.03
PHGDHO43175 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.49■■□□□ 1.03
PHGDHO43175 MIR3181-201ENST00000578512 73 ntBASIC21.49■■□□□ 1.03
PHGDHO43175 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PHGDHO43175 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PHGDHO43175 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.49■■□□□ 1.03
PHGDHO43175 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PHGDHO43175 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PHGDHO43175 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
PHGDHO43175 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PHGDHO43175 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PHGDHO43175 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PHGDHO43175 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PHGDHO43175 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PHGDHO43175 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.48■■□□□ 1.03
PHGDHO43175 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
PHGDHO43175 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.48■■□□□ 1.03
PHGDHO43175 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
PHGDHO43175 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PHGDHO43175 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PHGDHO43175 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PHGDHO43175 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.48■■□□□ 1.03
PHGDHO43175 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PHGDHO43175 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms