Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDC7O00311 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDC7O00311 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDC7O00311 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.31■■□□□ 1
CDC7O00311 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
CDC7O00311 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDC7O00311 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
CDC7O00311 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.3■■□□□ 1
CDC7O00311 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDC7O00311 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
CDC7O00311 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDC7O00311 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDC7O00311 AL136116.3-201ENST00000402907 1138 ntBASIC21.3■■□□□ 1
CDC7O00311 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.3■■□□□ 1
CDC7O00311 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.3■■□□□ 1
CDC7O00311 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDC7O00311 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.3■■□□□ 1
CDC7O00311 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.3■■□□□ 1
CDC7O00311 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDC7O00311 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CDC7O00311 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.29■■□□□ 1
CDC7O00311 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDC7O00311 DUX4L19-201ENST00000557448 1267 ntBASIC21.29■■□□□ 1
CDC7O00311 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDC7O00311 AL138724.1-201ENST00000606771 1088 ntBASIC21.29■■□□□ 1
CDC7O00311 AC131212.1-201ENST00000613771 668 ntBASIC21.29■■□□□ 1
CDC7O00311 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
CDC7O00311 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDC7O00311 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDC7O00311 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CDC7O00311 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDC7O00311 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CDC7O00311 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CDC7O00311 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CDC7O00311 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.28■■□□□ 1
CDC7O00311 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDC7O00311 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.28■■□□□ 1
CDC7O00311 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.28■■□□□ 1
CDC7O00311 AC079089.2-201ENST00000531211 1277 ntBASIC21.28■■□□□ 1
CDC7O00311 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDC7O00311 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
CDC7O00311 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDC7O00311 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.28■■□□□ 1
CDC7O00311 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CDC7O00311 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
CDC7O00311 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDC7O00311 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.27■■□□□ 1
CDC7O00311 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.27■■□□□ 1
CDC7O00311 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDC7O00311 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
CDC7O00311 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CDC7O00311 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.27■■□□□ 1
CDC7O00311 AC136469.2-201ENST00000623944 1028 ntBASIC21.27■■□□□ 1
CDC7O00311 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CDC7O00311 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
CDC7O00311 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CDC7O00311 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.27■□□□□ 0.99
CDC7O00311 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDC7O00311 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDC7O00311 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDC7O00311 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
CDC7O00311 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDC7O00311 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDC7O00311 AC010542.4-201ENST00000563151 1910 ntBASIC21.26■□□□□ 0.99
CDC7O00311 AC007375.3-201ENST00000600936 2314 ntBASIC21.26■□□□□ 0.99
CDC7O00311 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.26■□□□□ 0.99
CDC7O00311 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDC7O00311 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDC7O00311 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.26■□□□□ 0.99
CDC7O00311 AC011298.3-201ENST00000615796 283 ntBASIC21.26■□□□□ 0.99
CDC7O00311 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDC7O00311 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDC7O00311 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CDC7O00311 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
CDC7O00311 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDC7O00311 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.26■□□□□ 0.99
CDC7O00311 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.25■□□□□ 0.99
CDC7O00311 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDC7O00311 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDC7O00311 FAM99A-202ENST00000538190 1989 ntBASIC21.25■□□□□ 0.99
CDC7O00311 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDC7O00311 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDC7O00311 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDC7O00311 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.25■□□□□ 0.99
CDC7O00311 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDC7O00311 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDC7O00311 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.25■□□□□ 0.99
CDC7O00311 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDC7O00311 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.25■□□□□ 0.99
CDC7O00311 AC068587.7-201ENST00000641602 218 ntBASIC21.25■□□□□ 0.99
CDC7O00311 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CDC7O00311 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.24■□□□□ 0.99
CDC7O00311 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.24■□□□□ 0.99
CDC7O00311 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDC7O00311 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDC7O00311 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDC7O00311 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDC7O00311 SLC47A1P1-202ENST00000449666 945 ntBASIC21.24■□□□□ 0.99
CDC7O00311 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.24■□□□□ 0.99
CDC7O00311 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms