Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 AC245100.8-202ENST00000629247 1058 ntBASIC19.31■□□□□ 0.68
TVP23AA6NH52 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TVP23AA6NH52 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TVP23AA6NH52 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TVP23AA6NH52 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TVP23AA6NH52 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TVP23AA6NH52 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
TVP23AA6NH52 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TVP23AA6NH52 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TVP23AA6NH52 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TVP23AA6NH52 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.31■□□□□ 0.68
TVP23AA6NH52 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TVP23AA6NH52 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TVP23AA6NH52 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.3■□□□□ 0.68
TVP23AA6NH52 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.3■□□□□ 0.68
TVP23AA6NH52 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TVP23AA6NH52 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
TVP23AA6NH52 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
TVP23AA6NH52 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TVP23AA6NH52 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TVP23AA6NH52 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.3■□□□□ 0.68
TVP23AA6NH52 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TVP23AA6NH52 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TVP23AA6NH52 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
TVP23AA6NH52 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TVP23AA6NH52 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.3■□□□□ 0.68
TVP23AA6NH52 FAM99A-202ENST00000538190 1989 ntBASIC19.3■□□□□ 0.68
TVP23AA6NH52 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TVP23AA6NH52 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TVP23AA6NH52 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TVP23AA6NH52 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TVP23AA6NH52 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TVP23AA6NH52 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TVP23AA6NH52 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TVP23AA6NH52 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
TVP23AA6NH52 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TVP23AA6NH52 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
TVP23AA6NH52 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.29■□□□□ 0.68
TVP23AA6NH52 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TVP23AA6NH52 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.29■□□□□ 0.68
TVP23AA6NH52 AL356740.2-201ENST00000601559 647 ntBASIC19.29■□□□□ 0.68
TVP23AA6NH52 AC099791.2-201ENST00000605725 427 ntBASIC19.29■□□□□ 0.68
TVP23AA6NH52 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
TVP23AA6NH52 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TVP23AA6NH52 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
TVP23AA6NH52 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TVP23AA6NH52 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
TVP23AA6NH52 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TVP23AA6NH52 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.28■□□□□ 0.68
TVP23AA6NH52 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TVP23AA6NH52 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.28■□□□□ 0.68
TVP23AA6NH52 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TVP23AA6NH52 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
TVP23AA6NH52 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TVP23AA6NH52 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TVP23AA6NH52 GUSBP5-201ENST00000418136 578 ntBASIC19.28■□□□□ 0.68
TVP23AA6NH52 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.28■□□□□ 0.68
TVP23AA6NH52 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
TVP23AA6NH52 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.28■□□□□ 0.68
TVP23AA6NH52 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.28■□□□□ 0.68
TVP23AA6NH52 AC133637.1-201ENST00000624115 1537 ntBASIC19.28■□□□□ 0.68
TVP23AA6NH52 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.28■□□□□ 0.68
TVP23AA6NH52 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.28■□□□□ 0.68
TVP23AA6NH52 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.28■□□□□ 0.68
TVP23AA6NH52 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TVP23AA6NH52 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.28■□□□□ 0.68
TVP23AA6NH52 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.28■□□□□ 0.68
TVP23AA6NH52 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.28■□□□□ 0.68
TVP23AA6NH52 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.28■□□□□ 0.68
TVP23AA6NH52 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TVP23AA6NH52 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.28■□□□□ 0.68
TVP23AA6NH52 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TVP23AA6NH52 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.27■□□□□ 0.68
TVP23AA6NH52 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TVP23AA6NH52 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TVP23AA6NH52 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TVP23AA6NH52 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.27■□□□□ 0.68
TVP23AA6NH52 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.27■□□□□ 0.68
TVP23AA6NH52 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TVP23AA6NH52 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TVP23AA6NH52 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TVP23AA6NH52 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
TVP23AA6NH52 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.27■□□□□ 0.68
TVP23AA6NH52 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
TVP23AA6NH52 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TVP23AA6NH52 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TVP23AA6NH52 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
TVP23AA6NH52 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TVP23AA6NH52 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TVP23AA6NH52 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.26■□□□□ 0.67
TVP23AA6NH52 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TVP23AA6NH52 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TVP23AA6NH52 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.26■□□□□ 0.67
TVP23AA6NH52 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.26■□□□□ 0.67
TVP23AA6NH52 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.26■□□□□ 0.67
TVP23AA6NH52 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
TVP23AA6NH52 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TVP23AA6NH52 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TVP23AA6NH52 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TVP23AA6NH52 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms