Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 DUSP8P5-201ENST00000422884 1815 ntBASIC31.41■■■□□ 2.62
CCDC144AA2RUR9 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CCDC144AA2RUR9 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CCDC144AA2RUR9 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CCDC144AA2RUR9 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
CCDC144AA2RUR9 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC31.41■■■□□ 2.62
CCDC144AA2RUR9 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CCDC144AA2RUR9 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CCDC144AA2RUR9 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC31.4■■■□□ 2.62
CCDC144AA2RUR9 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CCDC144AA2RUR9 TESC-206ENST00000541210 936 ntTSL 3 BASIC31.4■■■□□ 2.62
CCDC144AA2RUR9 AC073111.5-205ENST00000641717 521 ntBASIC31.4■■■□□ 2.62
CCDC144AA2RUR9 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC31.4■■■□□ 2.62
CCDC144AA2RUR9 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CCDC144AA2RUR9 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CCDC144AA2RUR9 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC31.39■■■□□ 2.62
CCDC144AA2RUR9 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CCDC144AA2RUR9 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CCDC144AA2RUR9 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
CCDC144AA2RUR9 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
CCDC144AA2RUR9 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC31.39■■■□□ 2.62
CCDC144AA2RUR9 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC31.39■■■□□ 2.62
CCDC144AA2RUR9 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
CCDC144AA2RUR9 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC31.39■■■□□ 2.62
CCDC144AA2RUR9 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC31.39■■■□□ 2.62
CCDC144AA2RUR9 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC31.39■■■□□ 2.62
CCDC144AA2RUR9 AC080038.1-201ENST00000611274 1154 ntBASIC31.39■■■□□ 2.62
CCDC144AA2RUR9 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC31.38■■■□□ 2.61
CCDC144AA2RUR9 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CCDC144AA2RUR9 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC31.38■■■□□ 2.61
CCDC144AA2RUR9 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC31.38■■■□□ 2.61
CCDC144AA2RUR9 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CCDC144AA2RUR9 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CCDC144AA2RUR9 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
CCDC144AA2RUR9 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC31.38■■■□□ 2.61
CCDC144AA2RUR9 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC31.38■■■□□ 2.61
CCDC144AA2RUR9 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CCDC144AA2RUR9 AC055733.4-201ENST00000638462 1354 ntBASIC31.38■■■□□ 2.61
CCDC144AA2RUR9 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CCDC144AA2RUR9 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CCDC144AA2RUR9 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CCDC144AA2RUR9 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
CCDC144AA2RUR9 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC31.37■■■□□ 2.61
CCDC144AA2RUR9 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC31.37■■■□□ 2.61
CCDC144AA2RUR9 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CCDC144AA2RUR9 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC31.36■■■□□ 2.61
CCDC144AA2RUR9 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC31.36■■■□□ 2.61
CCDC144AA2RUR9 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CCDC144AA2RUR9 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CCDC144AA2RUR9 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC31.36■■■□□ 2.61
CCDC144AA2RUR9 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC31.36■■■□□ 2.61
CCDC144AA2RUR9 LINC00526-201ENST00000581067 1875 ntBASIC31.36■■■□□ 2.61
CCDC144AA2RUR9 GCA-201ENST00000233612 1694 ntTSL 2 BASIC31.36■■■□□ 2.61
CCDC144AA2RUR9 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC31.35■■■□□ 2.61
CCDC144AA2RUR9 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CCDC144AA2RUR9 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CCDC144AA2RUR9 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC31.35■■■□□ 2.61
CCDC144AA2RUR9 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CCDC144AA2RUR9 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
CCDC144AA2RUR9 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
CCDC144AA2RUR9 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC31.34■■■□□ 2.61
CCDC144AA2RUR9 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
CCDC144AA2RUR9 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC31.34■■■□□ 2.61
CCDC144AA2RUR9 AC104187.1-201ENST00000607510 612 ntBASIC31.34■■■□□ 2.61
CCDC144AA2RUR9 BID-214ENST00000617586 542 ntTSL 5 BASIC31.34■■■□□ 2.61
CCDC144AA2RUR9 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CCDC144AA2RUR9 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CCDC144AA2RUR9 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
CCDC144AA2RUR9 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC31.33■■■□□ 2.61
CCDC144AA2RUR9 CDCA4P2-201ENST00000441182 718 ntBASIC31.33■■■□□ 2.61
CCDC144AA2RUR9 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC31.33■■■□□ 2.61
CCDC144AA2RUR9 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
CCDC144AA2RUR9 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CCDC144AA2RUR9 NFE2L3P1-201ENST00000588207 1959 ntBASIC31.33■■■□□ 2.61
CCDC144AA2RUR9 MFF-207ENST00000409565 1548 ntTSL 2 BASIC31.33■■■□□ 2.61
CCDC144AA2RUR9 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC31.33■■■□□ 2.61
CCDC144AA2RUR9 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CCDC144AA2RUR9 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CCDC144AA2RUR9 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC31.33■■■□□ 2.61
CCDC144AA2RUR9 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC31.32■■■□□ 2.61
CCDC144AA2RUR9 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.61
CCDC144AA2RUR9 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC31.32■■■□□ 2.61
CCDC144AA2RUR9 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC31.32■■■□□ 2.61
CCDC144AA2RUR9 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC31.32■■■□□ 2.61
CCDC144AA2RUR9 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC31.32■■■□□ 2.61
CCDC144AA2RUR9 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC31.32■■■□□ 2.6
CCDC144AA2RUR9 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
CCDC144AA2RUR9 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC31.32■■■□□ 2.6
CCDC144AA2RUR9 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC31.32■■■□□ 2.6
CCDC144AA2RUR9 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC31.32■■■□□ 2.6
CCDC144AA2RUR9 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CCDC144AA2RUR9 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
CCDC144AA2RUR9 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC31.32■■■□□ 2.6
CCDC144AA2RUR9 ID1-201ENST00000376105 1233 ntBASIC31.32■■■□□ 2.6
CCDC144AA2RUR9 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC31.32■■■□□ 2.6
CCDC144AA2RUR9 ESRRAP2-201ENST00000418437 1549 ntBASIC31.31■■■□□ 2.6
CCDC144AA2RUR9 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
CCDC144AA2RUR9 OR7E47P-201ENST00000546390 1422 ntBASIC31.31■■■□□ 2.6
CCDC144AA2RUR9 AP004607.7-201ENST00000527152 1677 ntBASIC31.31■■■□□ 2.6
CCDC144AA2RUR9 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms