Protein–RNA interactions for Protein: A0A0U1RRI6

CENPVL3, Centromere protein V-like 3, humanhuman

Predictions only

Length 287 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPVL3A0A0U1RRI6 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
CENPVL3A0A0U1RRI6 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.6■□□□□ 0.41
CENPVL3A0A0U1RRI6 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.6■□□□□ 0.41
CENPVL3A0A0U1RRI6 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.6■□□□□ 0.41
CENPVL3A0A0U1RRI6 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CENPVL3A0A0U1RRI6 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CENPVL3A0A0U1RRI6 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CENPVL3A0A0U1RRI6 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CENPVL3A0A0U1RRI6 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CENPVL3A0A0U1RRI6 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CENPVL3A0A0U1RRI6 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.6■□□□□ 0.41
CENPVL3A0A0U1RRI6 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CENPVL3A0A0U1RRI6 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CENPVL3A0A0U1RRI6 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CENPVL3A0A0U1RRI6 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CENPVL3A0A0U1RRI6 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CENPVL3A0A0U1RRI6 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CENPVL3A0A0U1RRI6 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CENPVL3A0A0U1RRI6 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CENPVL3A0A0U1RRI6 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
CENPVL3A0A0U1RRI6 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.59■□□□□ 0.41
CENPVL3A0A0U1RRI6 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CENPVL3A0A0U1RRI6 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.59■□□□□ 0.41
CENPVL3A0A0U1RRI6 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.59■□□□□ 0.41
CENPVL3A0A0U1RRI6 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.59■□□□□ 0.41
CENPVL3A0A0U1RRI6 AL137784.2-201ENST00000607332 1000 ntBASIC17.59■□□□□ 0.41
CENPVL3A0A0U1RRI6 AC092437.1-201ENST00000624794 1048 ntBASIC17.59■□□□□ 0.41
CENPVL3A0A0U1RRI6 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.59■□□□□ 0.41
CENPVL3A0A0U1RRI6 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CENPVL3A0A0U1RRI6 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC17.59■□□□□ 0.41
CENPVL3A0A0U1RRI6 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CENPVL3A0A0U1RRI6 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CENPVL3A0A0U1RRI6 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CENPVL3A0A0U1RRI6 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.58■□□□□ 0.41
CENPVL3A0A0U1RRI6 AC009237.3-201ENST00000393279 1427 ntBASIC17.58■□□□□ 0.41
CENPVL3A0A0U1RRI6 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CENPVL3A0A0U1RRI6 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.58■□□□□ 0.4
CENPVL3A0A0U1RRI6 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.58■□□□□ 0.4
CENPVL3A0A0U1RRI6 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.58■□□□□ 0.4
CENPVL3A0A0U1RRI6 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.58■□□□□ 0.4
CENPVL3A0A0U1RRI6 KRT18P61-201ENST00000585825 1298 ntBASIC17.58■□□□□ 0.4
CENPVL3A0A0U1RRI6 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.58■□□□□ 0.4
CENPVL3A0A0U1RRI6 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.58■□□□□ 0.4
CENPVL3A0A0U1RRI6 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CENPVL3A0A0U1RRI6 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CENPVL3A0A0U1RRI6 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CENPVL3A0A0U1RRI6 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CENPVL3A0A0U1RRI6 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CENPVL3A0A0U1RRI6 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CENPVL3A0A0U1RRI6 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.57■□□□□ 0.4
CENPVL3A0A0U1RRI6 AP004607.4-201ENST00000530158 1459 ntBASIC17.57■□□□□ 0.4
CENPVL3A0A0U1RRI6 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
CENPVL3A0A0U1RRI6 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CENPVL3A0A0U1RRI6 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CENPVL3A0A0U1RRI6 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.57■□□□□ 0.4
CENPVL3A0A0U1RRI6 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CENPVL3A0A0U1RRI6 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CENPVL3A0A0U1RRI6 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.57■□□□□ 0.4
CENPVL3A0A0U1RRI6 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CENPVL3A0A0U1RRI6 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CENPVL3A0A0U1RRI6 AC005224.4-201ENST00000583262 1652 ntBASIC17.57■□□□□ 0.4
CENPVL3A0A0U1RRI6 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CENPVL3A0A0U1RRI6 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CENPVL3A0A0U1RRI6 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CENPVL3A0A0U1RRI6 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CENPVL3A0A0U1RRI6 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.57■□□□□ 0.4
CENPVL3A0A0U1RRI6 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CENPVL3A0A0U1RRI6 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CENPVL3A0A0U1RRI6 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.56■□□□□ 0.4
CENPVL3A0A0U1RRI6 AC004854.2-201ENST00000608450 1441 ntBASIC17.56■□□□□ 0.4
CENPVL3A0A0U1RRI6 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CENPVL3A0A0U1RRI6 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CENPVL3A0A0U1RRI6 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CENPVL3A0A0U1RRI6 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.56■□□□□ 0.4
CENPVL3A0A0U1RRI6 AC079140.4-201ENST00000507448 529 ntBASIC17.56■□□□□ 0.4
CENPVL3A0A0U1RRI6 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.56■□□□□ 0.4
CENPVL3A0A0U1RRI6 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.56■□□□□ 0.4
CENPVL3A0A0U1RRI6 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.56■□□□□ 0.4
CENPVL3A0A0U1RRI6 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CENPVL3A0A0U1RRI6 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CENPVL3A0A0U1RRI6 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CENPVL3A0A0U1RRI6 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CENPVL3A0A0U1RRI6 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CENPVL3A0A0U1RRI6 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.56■□□□□ 0.4
CENPVL3A0A0U1RRI6 LTK-203ENST00000453182 2412 ntTSL 2 BASIC17.56■□□□□ 0.4
CENPVL3A0A0U1RRI6 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
CENPVL3A0A0U1RRI6 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CENPVL3A0A0U1RRI6 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CENPVL3A0A0U1RRI6 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CENPVL3A0A0U1RRI6 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CENPVL3A0A0U1RRI6 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CENPVL3A0A0U1RRI6 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CENPVL3A0A0U1RRI6 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.55■□□□□ 0.4
CENPVL3A0A0U1RRI6 AC004911.1-201ENST00000416316 871 ntBASIC17.55■□□□□ 0.4
CENPVL3A0A0U1RRI6 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CENPVL3A0A0U1RRI6 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.55■□□□□ 0.4
CENPVL3A0A0U1RRI6 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.55■□□□□ 0.4
CENPVL3A0A0U1RRI6 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.55■□□□□ 0.4
CENPVL3A0A0U1RRI6 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.55■□□□□ 0.4
CENPVL3A0A0U1RRI6 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms