Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 AC138932.1-201ENST00000534164 6830 ntBASIC16.1■□□□□ 0.17
TRAV21A0A0B4J279 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC16.1■□□□□ 0.17
TRAV21A0A0B4J279 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
TRAV21A0A0B4J279 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV21A0A0B4J279 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV21A0A0B4J279 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV21A0A0B4J279 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV21A0A0B4J279 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC16.1■□□□□ 0.17
TRAV21A0A0B4J279 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV21A0A0B4J279 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV21A0A0B4J279 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV21A0A0B4J279 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV21A0A0B4J279 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV21A0A0B4J279 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV21A0A0B4J279 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV21A0A0B4J279 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TRAV21A0A0B4J279 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV21A0A0B4J279 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC16.09■□□□□ 0.17
TRAV21A0A0B4J279 CD72-202ENST00000378430 585 ntTSL 3 BASIC16.09■□□□□ 0.17
TRAV21A0A0B4J279 TFPT-201ENST00000391757 774 ntTSL 5 BASIC16.09■□□□□ 0.17
TRAV21A0A0B4J279 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV21A0A0B4J279 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV21A0A0B4J279 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV21A0A0B4J279 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV21A0A0B4J279 AC010542.4-201ENST00000563151 1910 ntBASIC16.09■□□□□ 0.17
TRAV21A0A0B4J279 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC16.09■□□□□ 0.17
TRAV21A0A0B4J279 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TRAV21A0A0B4J279 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TRAV21A0A0B4J279 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV21A0A0B4J279 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC16.09■□□□□ 0.17
TRAV21A0A0B4J279 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV21A0A0B4J279 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV21A0A0B4J279 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV21A0A0B4J279 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
TRAV21A0A0B4J279 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
TRAV21A0A0B4J279 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV21A0A0B4J279 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
TRAV21A0A0B4J279 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
TRAV21A0A0B4J279 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV21A0A0B4J279 EXOG-217ENST00000630638 197 ntTSL 5 BASIC16.08■□□□□ 0.16
TRAV21A0A0B4J279 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC16.08■□□□□ 0.16
TRAV21A0A0B4J279 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC16.08■□□□□ 0.16
TRAV21A0A0B4J279 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV21A0A0B4J279 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV21A0A0B4J279 C17orf82-201ENST00000623772 1530 ntBASIC16.08■□□□□ 0.16
TRAV21A0A0B4J279 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV21A0A0B4J279 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV21A0A0B4J279 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
TRAV21A0A0B4J279 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV21A0A0B4J279 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV21A0A0B4J279 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV21A0A0B4J279 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV21A0A0B4J279 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAV21A0A0B4J279 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV21A0A0B4J279 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV21A0A0B4J279 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TRAV21A0A0B4J279 MIR4787-201ENST00000607364 84 ntBASIC16.07■□□□□ 0.16
TRAV21A0A0B4J279 AC010997.5-201ENST00000609182 354 ntBASIC16.07■□□□□ 0.16
TRAV21A0A0B4J279 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV21A0A0B4J279 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TRAV21A0A0B4J279 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
TRAV21A0A0B4J279 VGF-203ENST00000611537 1622 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAV21A0A0B4J279 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV21A0A0B4J279 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV21A0A0B4J279 FAM99A-202ENST00000538190 1989 ntBASIC16.07■□□□□ 0.16
TRAV21A0A0B4J279 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV21A0A0B4J279 AL137060.1-201ENST00000618151 2648 ntBASIC16.07■□□□□ 0.16
TRAV21A0A0B4J279 USP48-205ENST00000421625 2818 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAV21A0A0B4J279 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV21A0A0B4J279 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TRAV21A0A0B4J279 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC16.06■□□□□ 0.16
TRAV21A0A0B4J279 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV21A0A0B4J279 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
TRAV21A0A0B4J279 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV21A0A0B4J279 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV21A0A0B4J279 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAV21A0A0B4J279 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TRAV21A0A0B4J279 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV21A0A0B4J279 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.06■□□□□ 0.16
TRAV21A0A0B4J279 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV21A0A0B4J279 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV21A0A0B4J279 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV21A0A0B4J279 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAV21A0A0B4J279 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV21A0A0B4J279 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV21A0A0B4J279 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV21A0A0B4J279 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV21A0A0B4J279 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV21A0A0B4J279 HES6-204ENST00000409182 863 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAV21A0A0B4J279 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV21A0A0B4J279 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAV21A0A0B4J279 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV21A0A0B4J279 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TRAV21A0A0B4J279 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
TRAV21A0A0B4J279 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAV21A0A0B4J279 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV21A0A0B4J279 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV21A0A0B4J279 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAV21A0A0B4J279 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV21A0A0B4J279 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms