Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAV12-1A0A0B4J245 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TRAV12-1A0A0B4J245 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TRAV12-1A0A0B4J245 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV12-1A0A0B4J245 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV12-1A0A0B4J245 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV12-1A0A0B4J245 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC15.21■□□□□ 0.03
TRAV12-1A0A0B4J245 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV12-1A0A0B4J245 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV12-1A0A0B4J245 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV12-1A0A0B4J245 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV12-1A0A0B4J245 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV12-1A0A0B4J245 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV12-1A0A0B4J245 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
TRAV12-1A0A0B4J245 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC15.21■□□□□ 0.03
TRAV12-1A0A0B4J245 RPS2P7-201ENST00000447334 885 ntBASIC15.21■□□□□ 0.03
TRAV12-1A0A0B4J245 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV12-1A0A0B4J245 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
TRAV12-1A0A0B4J245 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV12-1A0A0B4J245 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC15.21■□□□□ 0.02
TRAV12-1A0A0B4J245 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV12-1A0A0B4J245 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV12-1A0A0B4J245 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
TRAV12-1A0A0B4J245 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV12-1A0A0B4J245 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV12-1A0A0B4J245 FEM1AP1-201ENST00000431297 1995 ntBASIC15.2■□□□□ 0.02
TRAV12-1A0A0B4J245 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV12-1A0A0B4J245 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRAV12-1A0A0B4J245 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV12-1A0A0B4J245 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV12-1A0A0B4J245 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
TRAV12-1A0A0B4J245 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV12-1A0A0B4J245 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC15.2■□□□□ 0.02
TRAV12-1A0A0B4J245 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRAV12-1A0A0B4J245 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
TRAV12-1A0A0B4J245 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV12-1A0A0B4J245 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV12-1A0A0B4J245 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV12-1A0A0B4J245 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRAV12-1A0A0B4J245 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV12-1A0A0B4J245 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV12-1A0A0B4J245 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV12-1A0A0B4J245 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
TRAV12-1A0A0B4J245 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRAV12-1A0A0B4J245 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV12-1A0A0B4J245 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV12-1A0A0B4J245 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV12-1A0A0B4J245 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV12-1A0A0B4J245 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV12-1A0A0B4J245 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
TRAV12-1A0A0B4J245 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV12-1A0A0B4J245 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV12-1A0A0B4J245 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV12-1A0A0B4J245 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV12-1A0A0B4J245 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV12-1A0A0B4J245 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
TRAV12-1A0A0B4J245 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV12-1A0A0B4J245 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV12-1A0A0B4J245 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV12-1A0A0B4J245 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV12-1A0A0B4J245 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TRAV12-1A0A0B4J245 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TRAV12-1A0A0B4J245 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
TRAV12-1A0A0B4J245 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV12-1A0A0B4J245 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV12-1A0A0B4J245 AC011551.1-201ENST00000614101 683 ntBASIC15.18■□□□□ 0.02
TRAV12-1A0A0B4J245 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV12-1A0A0B4J245 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV12-1A0A0B4J245 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV12-1A0A0B4J245 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV12-1A0A0B4J245 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
TRAV12-1A0A0B4J245 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV12-1A0A0B4J245 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV12-1A0A0B4J245 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV12-1A0A0B4J245 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV12-1A0A0B4J245 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRAV12-1A0A0B4J245 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV12-1A0A0B4J245 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV12-1A0A0B4J245 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV12-1A0A0B4J245 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRAV12-1A0A0B4J245 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC15.17■□□□□ 0.02
TRAV12-1A0A0B4J245 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC15.17■□□□□ 0.02
TRAV12-1A0A0B4J245 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TRAV12-1A0A0B4J245 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV12-1A0A0B4J245 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
TRAV12-1A0A0B4J245 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TRAV12-1A0A0B4J245 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRAV12-1A0A0B4J245 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV12-1A0A0B4J245 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRAV12-1A0A0B4J245 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV12-1A0A0B4J245 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV12-1A0A0B4J245 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV12-1A0A0B4J245 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV12-1A0A0B4J245 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TRAV12-1A0A0B4J245 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV12-1A0A0B4J245 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV12-1A0A0B4J245 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV12-1A0A0B4J245 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV12-1A0A0B4J245 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV12-1A0A0B4J245 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms