Protein–RNA interactions for Protein: A0A075B6T7

TRAV6, T-cell receptor alpha variable 6 (Fragment), humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6A0A075B6T7 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV6A0A075B6T7 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.54■□□□□ 0.56
TRAV6A0A075B6T7 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV6A0A075B6T7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV6A0A075B6T7 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.53■□□□□ 0.56
TRAV6A0A075B6T7 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.53■□□□□ 0.56
TRAV6A0A075B6T7 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV6A0A075B6T7 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV6A0A075B6T7 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV6A0A075B6T7 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.53■□□□□ 0.56
TRAV6A0A075B6T7 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
TRAV6A0A075B6T7 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.53■□□□□ 0.56
TRAV6A0A075B6T7 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.53■□□□□ 0.56
TRAV6A0A075B6T7 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.52■□□□□ 0.56
TRAV6A0A075B6T7 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.52■□□□□ 0.56
TRAV6A0A075B6T7 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
TRAV6A0A075B6T7 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.52■□□□□ 0.56
TRAV6A0A075B6T7 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV6A0A075B6T7 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV6A0A075B6T7 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV6A0A075B6T7 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.52■□□□□ 0.56
TRAV6A0A075B6T7 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRAV6A0A075B6T7 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
TRAV6A0A075B6T7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRAV6A0A075B6T7 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
TRAV6A0A075B6T7 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV6A0A075B6T7 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV6A0A075B6T7 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV6A0A075B6T7 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV6A0A075B6T7 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV6A0A075B6T7 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.51■□□□□ 0.55
TRAV6A0A075B6T7 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV6A0A075B6T7 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.51■□□□□ 0.55
TRAV6A0A075B6T7 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC18.51■□□□□ 0.55
TRAV6A0A075B6T7 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.51■□□□□ 0.55
TRAV6A0A075B6T7 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
TRAV6A0A075B6T7 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TRAV6A0A075B6T7 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV6A0A075B6T7 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
TRAV6A0A075B6T7 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV6A0A075B6T7 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.51■□□□□ 0.55
TRAV6A0A075B6T7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.51■□□□□ 0.55
TRAV6A0A075B6T7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TRAV6A0A075B6T7 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV6A0A075B6T7 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.5■□□□□ 0.55
TRAV6A0A075B6T7 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.5■□□□□ 0.55
TRAV6A0A075B6T7 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV6A0A075B6T7 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TRAV6A0A075B6T7 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV6A0A075B6T7 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.5■□□□□ 0.55
TRAV6A0A075B6T7 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
TRAV6A0A075B6T7 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV6A0A075B6T7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.5■□□□□ 0.55
TRAV6A0A075B6T7 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC18.5■□□□□ 0.55
TRAV6A0A075B6T7 AGPS-202ENST00000409888 815 ntTSL 4 BASIC18.5■□□□□ 0.55
TRAV6A0A075B6T7 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV6A0A075B6T7 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
TRAV6A0A075B6T7 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV6A0A075B6T7 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV6A0A075B6T7 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.5■□□□□ 0.55
TRAV6A0A075B6T7 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV6A0A075B6T7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV6A0A075B6T7 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV6A0A075B6T7 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV6A0A075B6T7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV6A0A075B6T7 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV6A0A075B6T7 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC18.49■□□□□ 0.55
TRAV6A0A075B6T7 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC18.49■□□□□ 0.55
TRAV6A0A075B6T7 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV6A0A075B6T7 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TRAV6A0A075B6T7 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TRAV6A0A075B6T7 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV6A0A075B6T7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TRAV6A0A075B6T7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC18.49■□□□□ 0.55
TRAV6A0A075B6T7 AC092296.2-201ENST00000589470 999 ntBASIC18.49■□□□□ 0.55
TRAV6A0A075B6T7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.49■□□□□ 0.55
TRAV6A0A075B6T7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.49■□□□□ 0.55
TRAV6A0A075B6T7 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.49■□□□□ 0.55
TRAV6A0A075B6T7 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.49■□□□□ 0.55
TRAV6A0A075B6T7 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.49■□□□□ 0.55
TRAV6A0A075B6T7 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV6A0A075B6T7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV6A0A075B6T7 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV6A0A075B6T7 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV6A0A075B6T7 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV6A0A075B6T7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV6A0A075B6T7 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV6A0A075B6T7 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV6A0A075B6T7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TRAV6A0A075B6T7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV6A0A075B6T7 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV6A0A075B6T7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC18.48■□□□□ 0.55
TRAV6A0A075B6T7 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC18.48■□□□□ 0.55
TRAV6A0A075B6T7 RNF166-209ENST00000567844 633 ntTSL 5 BASIC18.48■□□□□ 0.55
TRAV6A0A075B6T7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV6A0A075B6T7 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
TRAV6A0A075B6T7 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV6A0A075B6T7 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV6A0A075B6T7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.48■□□□□ 0.55
TRAV6A0A075B6T7 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms