Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 KRT8P40-201ENST00000392131 563 ntBASIC12.28□□□□□ -0.44
NCDNQ9UBB6 HLA-DQA1-203ENST00000395363 1206 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
NCDNQ9UBB6 NPIPB2-202ENST00000399147 1194 ntAPPRIS P5 TSL 5 BASIC12.28□□□□□ -0.44
NCDNQ9UBB6 PSG5-207ENST00000407568 1064 ntTSL 2 BASIC12.28□□□□□ -0.44
NCDNQ9UBB6 AC074397.1-201ENST00000418013 1010 ntBASIC12.28□□□□□ -0.44
NCDNQ9UBB6 AC244453.1-201ENST00000427872 494 ntTSL 3 BASIC12.28□□□□□ -0.44
NCDNQ9UBB6 CBWD5-208ENST00000429800 1234 ntTSL 2 BASIC12.28□□□□□ -0.44
NCDNQ9UBB6 STYXL1-206ENST00000431581 1147 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
NCDNQ9UBB6 FAM238B-203ENST00000434458 880 ntTSL 3 BASIC12.28□□□□□ -0.44
NCDNQ9UBB6 AP000350.1-201ENST00000443377 532 ntBASIC12.28□□□□□ -0.44
NCDNQ9UBB6 AC078962.1-201ENST00000444853 281 ntTSL 5 BASIC12.28□□□□□ -0.44
NCDNQ9UBB6 PHBP5-201ENST00000449310 768 ntBASIC12.28□□□□□ -0.44
NCDNQ9UBB6 HS1BP3-IT1-201ENST00000449391 600 ntTSL 2 BASIC12.28□□□□□ -0.44
NCDNQ9UBB6 AC072022.2-201ENST00000449623 672 ntTSL 2 BASIC12.28□□□□□ -0.44
NCDNQ9UBB6 OR1X5P-201ENST00000510464 894 ntBASIC12.28□□□□□ -0.44
NCDNQ9UBB6 AC023078.7-201ENST00000532712 961 ntBASIC12.28□□□□□ -0.44
NCDNQ9UBB6 AC087699.1-201ENST00000558111 393 ntBASIC12.28□□□□□ -0.44
NCDNQ9UBB6 AC021755.2-201ENST00000559022 461 ntTSL 5 BASIC12.28□□□□□ -0.44
NCDNQ9UBB6 AC010761.4-201ENST00000577325 521 ntTSL 3 BASIC12.28□□□□□ -0.44
NCDNQ9UBB6 SLC25A1P5-201ENST00000587610 783 ntBASIC12.28□□□□□ -0.44
NCDNQ9UBB6 AC011471.2-201ENST00000588192 523 ntTSL 4 BASIC12.28□□□□□ -0.44
NCDNQ9UBB6 AC020663.2-201ENST00000592465 720 ntTSL 3 BASIC12.28□□□□□ -0.44
NCDNQ9UBB6 AC020728.1-201ENST00000605749 1216 ntBASIC12.28□□□□□ -0.44
NCDNQ9UBB6 AC137936.2-201ENST00000636329 620 ntBASIC12.28□□□□□ -0.44
NCDNQ9UBB6 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC12.28□□□□□ -0.44
NCDNQ9UBB6 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
NCDNQ9UBB6 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NCDNQ9UBB6 TACC1-208ENST00000520340 1976 ntTSL 5 BASIC12.28□□□□□ -0.44
NCDNQ9UBB6 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC12.28□□□□□ -0.44
NCDNQ9UBB6 ALG8-201ENST00000299626 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NCDNQ9UBB6 IQCD-202ENST00000416617 1673 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
NCDNQ9UBB6 SEMA6A-205ENST00000503865 1678 ntTSL 2 BASIC12.28□□□□□ -0.44
NCDNQ9UBB6 AC010336.1-201ENST00000539278 4739 ntBASIC12.28□□□□□ -0.44
NCDNQ9UBB6 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NCDNQ9UBB6 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NCDNQ9UBB6 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
NCDNQ9UBB6 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NCDNQ9UBB6 ARMCX6-201ENST00000361910 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
NCDNQ9UBB6 FER1L5-207ENST00000641731 6294 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.44
NCDNQ9UBB6 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
NCDNQ9UBB6 KIR3DL2-202ENST00000326321 1877 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
NCDNQ9UBB6 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
NCDNQ9UBB6 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
NCDNQ9UBB6 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
NCDNQ9UBB6 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
NCDNQ9UBB6 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
NCDNQ9UBB6 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
NCDNQ9UBB6 ZNF606-204ENST00000547828 2680 ntTSL 2 BASIC12.27□□□□□ -0.44
NCDNQ9UBB6 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC12.27□□□□□ -0.44
NCDNQ9UBB6 DRD3-204ENST00000467632 1554 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
NCDNQ9UBB6 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
NCDNQ9UBB6 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
NCDNQ9UBB6 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
NCDNQ9UBB6 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC12.27□□□□□ -0.45
NCDNQ9UBB6 IGLV1-40-201ENST00000390299 407 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
NCDNQ9UBB6 FAM238A-201ENST00000412114 1091 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
NCDNQ9UBB6 AL590068.2-201ENST00000426067 378 ntTSL 3 BASIC12.27□□□□□ -0.45
NCDNQ9UBB6 HUNK-AS1-201ENST00000437109 616 ntTSL 3 BASIC12.27□□□□□ -0.45
NCDNQ9UBB6 AL669970.2-201ENST00000446184 280 ntTSL 3 BASIC12.27□□□□□ -0.45
NCDNQ9UBB6 AL359504.1-201ENST00000448052 493 ntBASIC12.27□□□□□ -0.45
NCDNQ9UBB6 GUSBP1-201ENST00000449061 758 ntBASIC12.27□□□□□ -0.45
NCDNQ9UBB6 E2F6P4-201ENST00000468625 514 ntBASIC12.27□□□□□ -0.45
NCDNQ9UBB6 AC104819.2-201ENST00000507181 163 ntBASIC12.27□□□□□ -0.45
NCDNQ9UBB6 ZNF331-218ENST00000513265 739 ntTSL 3 BASIC12.27□□□□□ -0.45
NCDNQ9UBB6 FAU-206ENST00000529259 1125 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
NCDNQ9UBB6 AL132709.1-205ENST00000556136 551 ntTSL 4 BASIC12.27□□□□□ -0.45
NCDNQ9UBB6 SLC39A9-210ENST00000557046 855 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
NCDNQ9UBB6 ACTG1P16-201ENST00000564713 1082 ntBASIC12.27□□□□□ -0.45
NCDNQ9UBB6 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC12.27□□□□□ -0.45
NCDNQ9UBB6 Metazoa_SRP.51-201ENST00000570437 272 ntBASIC12.27□□□□□ -0.45
NCDNQ9UBB6 SIGLEC17P-201ENST00000593736 484 ntBASIC12.27□□□□□ -0.45
NCDNQ9UBB6 AC010524.1-201ENST00000596488 494 ntTSL 3 BASIC12.27□□□□□ -0.45
NCDNQ9UBB6 AP000345.2-201ENST00000608615 1081 ntTSL 3 BASIC12.27□□□□□ -0.45
NCDNQ9UBB6 IGKV1D-13-201ENST00000611391 376 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
NCDNQ9UBB6 LINC01632-202ENST00000617368 533 ntTSL 5 BASIC12.27□□□□□ -0.45
NCDNQ9UBB6 KRTAP4-9-202ENST00000617453 558 ntTSL 5 BASIC12.27□□□□□ -0.45
NCDNQ9UBB6 LINC00680-206ENST00000635948 181 ntBASIC12.27□□□□□ -0.45
NCDNQ9UBB6 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC12.27□□□□□ -0.45
NCDNQ9UBB6 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NCDNQ9UBB6 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
NCDNQ9UBB6 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
NCDNQ9UBB6 CYLD-214ENST00000569418 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NCDNQ9UBB6 TIAF1-201ENST00000359450 5337 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
NCDNQ9UBB6 GDA-203ENST00000376986 1771 ntTSL 2 BASIC12.27□□□□□ -0.45
NCDNQ9UBB6 AC009927.1-201ENST00000510501 1779 ntBASIC12.27□□□□□ -0.45
NCDNQ9UBB6 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
NCDNQ9UBB6 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NCDNQ9UBB6 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NCDNQ9UBB6 AC007614.4-201ENST00000564048 1827 ntBASIC12.27□□□□□ -0.45
NCDNQ9UBB6 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
NCDNQ9UBB6 CEP170-204ENST00000366544 6805 ntTSL 5 BASIC12.27□□□□□ -0.45
NCDNQ9UBB6 ATCAY-205ENST00000600960 2904 ntTSL 5 BASIC12.27□□□□□ -0.45
NCDNQ9UBB6 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
NCDNQ9UBB6 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
NCDNQ9UBB6 TMEM253-201ENST00000418511 1526 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
NCDNQ9UBB6 ARHGEF10-205ENST00000518288 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
NCDNQ9UBB6 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NCDNQ9UBB6 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NCDNQ9UBB6 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NCDNQ9UBB6 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 147.2 ms