Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
DDX49Q9Y6V7 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
DDX49Q9Y6V7 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC25.96■■□□□ 1.75
DDX49Q9Y6V7 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
DDX49Q9Y6V7 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC25.95■■□□□ 1.74
DDX49Q9Y6V7 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC25.95■■□□□ 1.74
DDX49Q9Y6V7 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
DDX49Q9Y6V7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
DDX49Q9Y6V7 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC25.95■■□□□ 1.74
DDX49Q9Y6V7 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
DDX49Q9Y6V7 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
DDX49Q9Y6V7 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
DDX49Q9Y6V7 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC25.94■■□□□ 1.74
DDX49Q9Y6V7 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
DDX49Q9Y6V7 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
DDX49Q9Y6V7 MIR939-201ENST00000401314 82 ntBASIC25.94■■□□□ 1.74
DDX49Q9Y6V7 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC25.94■■□□□ 1.74
DDX49Q9Y6V7 AC026271.2-201ENST00000428091 497 ntBASIC25.94■■□□□ 1.74
DDX49Q9Y6V7 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
DDX49Q9Y6V7 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC25.94■■□□□ 1.74
DDX49Q9Y6V7 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
DDX49Q9Y6V7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
DDX49Q9Y6V7 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
DDX49Q9Y6V7 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
DDX49Q9Y6V7 BID-212ENST00000614949 1988 ntTSL 5 BASIC25.93■■□□□ 1.74
DDX49Q9Y6V7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC25.93■■□□□ 1.74
DDX49Q9Y6V7 USF2-207ENST00000595068 1612 ntTSL 5 BASIC25.93■■□□□ 1.74
DDX49Q9Y6V7 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
DDX49Q9Y6V7 PTMA-205ENST00000410064 814 ntTSL 2 BASIC25.93■■□□□ 1.74
DDX49Q9Y6V7 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
DDX49Q9Y6V7 PTCHD3P2-201ENST00000424937 1205 ntBASIC25.93■■□□□ 1.74
DDX49Q9Y6V7 LGR4-203ENST00000480977 492 ntTSL 2 BASIC25.93■■□□□ 1.74
DDX49Q9Y6V7 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
DDX49Q9Y6V7 C11orf96-202ENST00000528572 1834 ntBASIC25.93■■□□□ 1.74
DDX49Q9Y6V7 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
DDX49Q9Y6V7 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
DDX49Q9Y6V7 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
DDX49Q9Y6V7 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
DDX49Q9Y6V7 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
DDX49Q9Y6V7 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
DDX49Q9Y6V7 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
DDX49Q9Y6V7 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC25.92■■□□□ 1.74
DDX49Q9Y6V7 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC25.92■■□□□ 1.74
DDX49Q9Y6V7 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
DDX49Q9Y6V7 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
DDX49Q9Y6V7 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
DDX49Q9Y6V7 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
DDX49Q9Y6V7 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC25.91■■□□□ 1.74
DDX49Q9Y6V7 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
DDX49Q9Y6V7 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC25.91■■□□□ 1.74
DDX49Q9Y6V7 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC25.91■■□□□ 1.74
DDX49Q9Y6V7 C17orf82-201ENST00000623772 1530 ntBASIC25.91■■□□□ 1.74
DDX49Q9Y6V7 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
DDX49Q9Y6V7 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
DDX49Q9Y6V7 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC25.91■■□□□ 1.74
DDX49Q9Y6V7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
DDX49Q9Y6V7 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
DDX49Q9Y6V7 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
DDX49Q9Y6V7 AC139530.1-201ENST00000575312 1977 ntBASIC25.91■■□□□ 1.74
DDX49Q9Y6V7 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
DDX49Q9Y6V7 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
DDX49Q9Y6V7 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
DDX49Q9Y6V7 AC092053.2-201ENST00000640557 1818 ntBASIC25.91■■□□□ 1.74
DDX49Q9Y6V7 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
DDX49Q9Y6V7 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
DDX49Q9Y6V7 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC25.9■■□□□ 1.74
DDX49Q9Y6V7 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
DDX49Q9Y6V7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
DDX49Q9Y6V7 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
DDX49Q9Y6V7 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC25.9■■□□□ 1.74
DDX49Q9Y6V7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
DDX49Q9Y6V7 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
DDX49Q9Y6V7 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
DDX49Q9Y6V7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
DDX49Q9Y6V7 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
DDX49Q9Y6V7 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
DDX49Q9Y6V7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
DDX49Q9Y6V7 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
DDX49Q9Y6V7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
DDX49Q9Y6V7 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC25.89■■□□□ 1.74
DDX49Q9Y6V7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.74
DDX49Q9Y6V7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC25.89■■□□□ 1.74
DDX49Q9Y6V7 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.73
DDX49Q9Y6V7 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.73
DDX49Q9Y6V7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.73
DDX49Q9Y6V7 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
DDX49Q9Y6V7 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC25.88■■□□□ 1.73
DDX49Q9Y6V7 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
DDX49Q9Y6V7 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
DDX49Q9Y6V7 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
DDX49Q9Y6V7 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
DDX49Q9Y6V7 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC25.88■■□□□ 1.73
DDX49Q9Y6V7 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
DDX49Q9Y6V7 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC25.88■■□□□ 1.73
DDX49Q9Y6V7 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
DDX49Q9Y6V7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
DDX49Q9Y6V7 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
DDX49Q9Y6V7 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC25.87■■□□□ 1.73
DDX49Q9Y6V7 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
DDX49Q9Y6V7 ALDH1A3-203ENST00000557963 1670 ntBASIC25.87■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms