Protein–RNA interactions for Protein: Q9Y5H9

PCDHA2, Protocadherin alpha-2, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2Q9Y5H9 TERT-206ENST00000508104 2486 ntTSL 5 BASIC24.44■■□□□ 1.5
PCDHA2Q9Y5H9 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHA2Q9Y5H9 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHA2Q9Y5H9 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHA2Q9Y5H9 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC24.44■■□□□ 1.5
PCDHA2Q9Y5H9 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC24.44■■□□□ 1.5
PCDHA2Q9Y5H9 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC24.44■■□□□ 1.5
PCDHA2Q9Y5H9 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC24.44■■□□□ 1.5
PCDHA2Q9Y5H9 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHA2Q9Y5H9 AC233723.2-201ENST00000623798 2106 ntBASIC24.44■■□□□ 1.5
PCDHA2Q9Y5H9 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
PCDHA2Q9Y5H9 AC087742.1-201ENST00000575880 1738 ntBASIC24.44■■□□□ 1.5
PCDHA2Q9Y5H9 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHA2Q9Y5H9 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHA2Q9Y5H9 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHA2Q9Y5H9 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC24.43■■□□□ 1.5
PCDHA2Q9Y5H9 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHA2Q9Y5H9 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHA2Q9Y5H9 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHA2Q9Y5H9 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHA2Q9Y5H9 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC24.43■■□□□ 1.5
PCDHA2Q9Y5H9 AC004687.1-201ENST00000579003 1625 ntBASIC24.43■■□□□ 1.5
PCDHA2Q9Y5H9 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHA2Q9Y5H9 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHA2Q9Y5H9 KRT18P5-201ENST00000436075 1291 ntBASIC24.43■■□□□ 1.5
PCDHA2Q9Y5H9 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC24.43■■□□□ 1.5
PCDHA2Q9Y5H9 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHA2Q9Y5H9 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHA2Q9Y5H9 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHA2Q9Y5H9 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHA2Q9Y5H9 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
PCDHA2Q9Y5H9 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
PCDHA2Q9Y5H9 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PCDHA2Q9Y5H9 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PCDHA2Q9Y5H9 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC24.42■■□□□ 1.5
PCDHA2Q9Y5H9 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC24.42■■□□□ 1.5
PCDHA2Q9Y5H9 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC24.42■■□□□ 1.5
PCDHA2Q9Y5H9 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PCDHA2Q9Y5H9 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PCDHA2Q9Y5H9 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC24.42■■□□□ 1.5
PCDHA2Q9Y5H9 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PCDHA2Q9Y5H9 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
PCDHA2Q9Y5H9 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC24.42■■□□□ 1.5
PCDHA2Q9Y5H9 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC24.42■■□□□ 1.5
PCDHA2Q9Y5H9 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHA2Q9Y5H9 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHA2Q9Y5H9 MPST-204ENST00000404393 1329 ntTSL 5 BASIC24.41■■□□□ 1.5
PCDHA2Q9Y5H9 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHA2Q9Y5H9 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC24.41■■□□□ 1.5
PCDHA2Q9Y5H9 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHA2Q9Y5H9 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC24.41■■□□□ 1.5
PCDHA2Q9Y5H9 AC105233.4-201ENST00000642045 216 ntBASIC24.41■■□□□ 1.5
PCDHA2Q9Y5H9 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHA2Q9Y5H9 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC24.41■■□□□ 1.5
PCDHA2Q9Y5H9 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHA2Q9Y5H9 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHA2Q9Y5H9 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHA2Q9Y5H9 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC24.41■■□□□ 1.5
PCDHA2Q9Y5H9 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHA2Q9Y5H9 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC24.4■■□□□ 1.5
PCDHA2Q9Y5H9 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHA2Q9Y5H9 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHA2Q9Y5H9 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC24.4■■□□□ 1.5
PCDHA2Q9Y5H9 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC24.4■■□□□ 1.5
PCDHA2Q9Y5H9 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHA2Q9Y5H9 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHA2Q9Y5H9 CCDC92B-201ENST00000575506 885 ntBASIC24.4■■□□□ 1.5
PCDHA2Q9Y5H9 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHA2Q9Y5H9 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHA2Q9Y5H9 ESRRAP2-201ENST00000418437 1549 ntBASIC24.4■■□□□ 1.5
PCDHA2Q9Y5H9 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHA2Q9Y5H9 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
PCDHA2Q9Y5H9 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
PCDHA2Q9Y5H9 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
PCDHA2Q9Y5H9 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.5
PCDHA2Q9Y5H9 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PCDHA2Q9Y5H9 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
PCDHA2Q9Y5H9 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
PCDHA2Q9Y5H9 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC24.39■■□□□ 1.49
PCDHA2Q9Y5H9 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC24.39■■□□□ 1.49
PCDHA2Q9Y5H9 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC24.39■■□□□ 1.49
PCDHA2Q9Y5H9 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
PCDHA2Q9Y5H9 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PCDHA2Q9Y5H9 LINC02228-203ENST00000641970 1355 ntBASIC24.39■■□□□ 1.49
PCDHA2Q9Y5H9 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
PCDHA2Q9Y5H9 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC24.38■■□□□ 1.49
PCDHA2Q9Y5H9 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHA2Q9Y5H9 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHA2Q9Y5H9 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHA2Q9Y5H9 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHA2Q9Y5H9 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
PCDHA2Q9Y5H9 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
PCDHA2Q9Y5H9 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC24.38■■□□□ 1.49
PCDHA2Q9Y5H9 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHA2Q9Y5H9 TERF1P2-201ENST00000583350 1212 ntBASIC24.38■■□□□ 1.49
PCDHA2Q9Y5H9 AC022517.1-201ENST00000592429 346 ntBASIC24.38■■□□□ 1.49
PCDHA2Q9Y5H9 AC068587.7-201ENST00000641602 218 ntBASIC24.38■■□□□ 1.49
PCDHA2Q9Y5H9 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHA2Q9Y5H9 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC24.38■■□□□ 1.49
PCDHA2Q9Y5H9 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms