Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
POLR1DQ9Y2S0 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
POLR1DQ9Y2S0 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.35■□□□□ 0.69
POLR1DQ9Y2S0 AC099791.2-201ENST00000605725 427 ntBASIC19.35■□□□□ 0.69
POLR1DQ9Y2S0 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR1DQ9Y2S0 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR1DQ9Y2S0 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR1DQ9Y2S0 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR1DQ9Y2S0 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
POLR1DQ9Y2S0 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
POLR1DQ9Y2S0 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR1DQ9Y2S0 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.34■□□□□ 0.69
POLR1DQ9Y2S0 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR1DQ9Y2S0 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
POLR1DQ9Y2S0 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.34■□□□□ 0.69
POLR1DQ9Y2S0 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.34■□□□□ 0.69
POLR1DQ9Y2S0 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
POLR1DQ9Y2S0 pRNA.6-201ENST00000610482 90 ntBASIC19.34■□□□□ 0.69
POLR1DQ9Y2S0 pRNA.5-201ENST00000612139 90 ntBASIC19.34■□□□□ 0.69
POLR1DQ9Y2S0 pRNA.11-201ENST00000618423 90 ntBASIC19.34■□□□□ 0.69
POLR1DQ9Y2S0 pRNA.13-201ENST00000619112 90 ntBASIC19.34■□□□□ 0.69
POLR1DQ9Y2S0 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
POLR1DQ9Y2S0 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR1DQ9Y2S0 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.34■□□□□ 0.69
POLR1DQ9Y2S0 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
POLR1DQ9Y2S0 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR1DQ9Y2S0 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
POLR1DQ9Y2S0 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR1DQ9Y2S0 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
POLR1DQ9Y2S0 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR1DQ9Y2S0 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
POLR1DQ9Y2S0 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
POLR1DQ9Y2S0 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
POLR1DQ9Y2S0 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.33■□□□□ 0.69
POLR1DQ9Y2S0 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
POLR1DQ9Y2S0 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
POLR1DQ9Y2S0 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
POLR1DQ9Y2S0 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
POLR1DQ9Y2S0 AC006455.2-201ENST00000429931 906 ntBASIC19.33■□□□□ 0.68
POLR1DQ9Y2S0 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.33■□□□□ 0.68
POLR1DQ9Y2S0 AL499627.2-201ENST00000606283 725 ntBASIC19.33■□□□□ 0.68
POLR1DQ9Y2S0 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
POLR1DQ9Y2S0 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
POLR1DQ9Y2S0 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
POLR1DQ9Y2S0 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
POLR1DQ9Y2S0 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLR1DQ9Y2S0 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
POLR1DQ9Y2S0 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
POLR1DQ9Y2S0 AC080038.3-201ENST00000623346 1952 ntBASIC19.32■□□□□ 0.68
POLR1DQ9Y2S0 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLR1DQ9Y2S0 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
POLR1DQ9Y2S0 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLR1DQ9Y2S0 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.32■□□□□ 0.68
POLR1DQ9Y2S0 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
POLR1DQ9Y2S0 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.32■□□□□ 0.68
POLR1DQ9Y2S0 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.32■□□□□ 0.68
POLR1DQ9Y2S0 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
POLR1DQ9Y2S0 AC092171.4-201ENST00000609130 632 ntBASIC19.32■□□□□ 0.68
POLR1DQ9Y2S0 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.32■□□□□ 0.68
POLR1DQ9Y2S0 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLR1DQ9Y2S0 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.32■□□□□ 0.68
POLR1DQ9Y2S0 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLR1DQ9Y2S0 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLR1DQ9Y2S0 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
POLR1DQ9Y2S0 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLR1DQ9Y2S0 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.32■□□□□ 0.68
POLR1DQ9Y2S0 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
POLR1DQ9Y2S0 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLR1DQ9Y2S0 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLR1DQ9Y2S0 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLR1DQ9Y2S0 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.32■□□□□ 0.68
POLR1DQ9Y2S0 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
POLR1DQ9Y2S0 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLR1DQ9Y2S0 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLR1DQ9Y2S0 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLR1DQ9Y2S0 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.31■□□□□ 0.68
POLR1DQ9Y2S0 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
POLR1DQ9Y2S0 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLR1DQ9Y2S0 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLR1DQ9Y2S0 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLR1DQ9Y2S0 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.31■□□□□ 0.68
POLR1DQ9Y2S0 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
POLR1DQ9Y2S0 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLR1DQ9Y2S0 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLR1DQ9Y2S0 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLR1DQ9Y2S0 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLR1DQ9Y2S0 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLR1DQ9Y2S0 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.31■□□□□ 0.68
POLR1DQ9Y2S0 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
POLR1DQ9Y2S0 AC133637.1-201ENST00000624115 1537 ntBASIC19.3■□□□□ 0.68
POLR1DQ9Y2S0 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
POLR1DQ9Y2S0 AC092053.2-201ENST00000640557 1818 ntBASIC19.3■□□□□ 0.68
POLR1DQ9Y2S0 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
POLR1DQ9Y2S0 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
POLR1DQ9Y2S0 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
POLR1DQ9Y2S0 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.3■□□□□ 0.68
POLR1DQ9Y2S0 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
POLR1DQ9Y2S0 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
POLR1DQ9Y2S0 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.3■□□□□ 0.68
POLR1DQ9Y2S0 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms