Protein–RNA interactions for Protein: Q9UN72

PCDHA7, Protocadherin alpha-7, humanhuman

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA7Q9UN72 pRNA.5-201ENST00000612139 90 ntBASIC24.76■■□□□ 1.55
PCDHA7Q9UN72 pRNA.11-201ENST00000618423 90 ntBASIC24.76■■□□□ 1.55
PCDHA7Q9UN72 pRNA.13-201ENST00000619112 90 ntBASIC24.76■■□□□ 1.55
PCDHA7Q9UN72 AL031602.1-201ENST00000633169 911 ntBASIC24.76■■□□□ 1.55
PCDHA7Q9UN72 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC24.76■■□□□ 1.55
PCDHA7Q9UN72 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC24.76■■□□□ 1.55
PCDHA7Q9UN72 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC24.76■■□□□ 1.55
PCDHA7Q9UN72 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHA7Q9UN72 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC24.75■■□□□ 1.55
PCDHA7Q9UN72 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHA7Q9UN72 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHA7Q9UN72 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC24.75■■□□□ 1.55
PCDHA7Q9UN72 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC24.75■■□□□ 1.55
PCDHA7Q9UN72 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC24.75■■□□□ 1.55
PCDHA7Q9UN72 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC24.75■■□□□ 1.55
PCDHA7Q9UN72 AC099791.2-201ENST00000605725 427 ntBASIC24.75■■□□□ 1.55
PCDHA7Q9UN72 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
PCDHA7Q9UN72 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC24.75■■□□□ 1.55
PCDHA7Q9UN72 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHA7Q9UN72 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
PCDHA7Q9UN72 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHA7Q9UN72 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC24.74■■□□□ 1.55
PCDHA7Q9UN72 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC24.74■■□□□ 1.55
PCDHA7Q9UN72 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC24.74■■□□□ 1.55
PCDHA7Q9UN72 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHA7Q9UN72 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC24.74■■□□□ 1.55
PCDHA7Q9UN72 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHA7Q9UN72 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHA7Q9UN72 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC24.73■■□□□ 1.55
PCDHA7Q9UN72 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHA7Q9UN72 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHA7Q9UN72 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC24.73■■□□□ 1.55
PCDHA7Q9UN72 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC24.73■■□□□ 1.55
PCDHA7Q9UN72 MIR3621-201ENST00000580529 85 ntBASIC24.73■■□□□ 1.55
PCDHA7Q9UN72 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
PCDHA7Q9UN72 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHA7Q9UN72 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHA7Q9UN72 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC24.73■■□□□ 1.55
PCDHA7Q9UN72 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PCDHA7Q9UN72 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
PCDHA7Q9UN72 GATM-206ENST00000558336 1522 ntTSL 2 BASIC24.72■■□□□ 1.55
PCDHA7Q9UN72 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDHA7Q9UN72 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
PCDHA7Q9UN72 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PCDHA7Q9UN72 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PCDHA7Q9UN72 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
PCDHA7Q9UN72 AL356740.2-201ENST00000601559 647 ntBASIC24.72■■□□□ 1.55
PCDHA7Q9UN72 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PCDHA7Q9UN72 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
PCDHA7Q9UN72 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC24.71■■□□□ 1.55
PCDHA7Q9UN72 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHA7Q9UN72 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
PCDHA7Q9UN72 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC24.71■■□□□ 1.55
PCDHA7Q9UN72 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHA7Q9UN72 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHA7Q9UN72 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
PCDHA7Q9UN72 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHA7Q9UN72 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
PCDHA7Q9UN72 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.55
PCDHA7Q9UN72 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.55
PCDHA7Q9UN72 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC24.7■■□□□ 1.54
PCDHA7Q9UN72 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
PCDHA7Q9UN72 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
PCDHA7Q9UN72 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC24.7■■□□□ 1.54
PCDHA7Q9UN72 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PCDHA7Q9UN72 ME2-206ENST00000638410 2289 ntTSL 5 BASIC24.7■■□□□ 1.54
PCDHA7Q9UN72 ME2-210ENST00000639255 2262 ntTSL 5 BASIC24.7■■□□□ 1.54
PCDHA7Q9UN72 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC24.7■■□□□ 1.54
PCDHA7Q9UN72 STX4-202ENST00000394998 1498 ntTSL 2 BASIC24.7■■□□□ 1.54
PCDHA7Q9UN72 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHA7Q9UN72 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHA7Q9UN72 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC24.69■■□□□ 1.54
PCDHA7Q9UN72 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
PCDHA7Q9UN72 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHA7Q9UN72 USP45-205ENST00000472914 1617 ntTSL 5 BASIC24.69■■□□□ 1.54
PCDHA7Q9UN72 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHA7Q9UN72 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHA7Q9UN72 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHA7Q9UN72 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHA7Q9UN72 QDPR-206ENST00000508623 601 ntTSL 3 BASIC24.69■■□□□ 1.54
PCDHA7Q9UN72 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHA7Q9UN72 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC24.69■■□□□ 1.54
PCDHA7Q9UN72 GRAMD4P7-201ENST00000578182 1232 ntBASIC24.69■■□□□ 1.54
PCDHA7Q9UN72 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC24.69■■□□□ 1.54
PCDHA7Q9UN72 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHA7Q9UN72 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC24.69■■□□□ 1.54
PCDHA7Q9UN72 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHA7Q9UN72 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHA7Q9UN72 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHA7Q9UN72 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHA7Q9UN72 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHA7Q9UN72 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHA7Q9UN72 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHA7Q9UN72 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHA7Q9UN72 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHA7Q9UN72 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
PCDHA7Q9UN72 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
PCDHA7Q9UN72 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHA7Q9UN72 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHA7Q9UN72 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms