Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPHK1Q9NYA1 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPHK1Q9NYA1 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SPHK1Q9NYA1 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.99■□□□□ 0.95
SPHK1Q9NYA1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPHK1Q9NYA1 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SPHK1Q9NYA1 AC026271.2-201ENST00000428091 497 ntBASIC20.99■□□□□ 0.95
SPHK1Q9NYA1 SMUG1P1-201ENST00000590640 811 ntBASIC20.99■□□□□ 0.95
SPHK1Q9NYA1 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.99■□□□□ 0.95
SPHK1Q9NYA1 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SPHK1Q9NYA1 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.99■□□□□ 0.95
SPHK1Q9NYA1 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SPHK1Q9NYA1 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SPHK1Q9NYA1 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SPHK1Q9NYA1 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.98■□□□□ 0.95
SPHK1Q9NYA1 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPHK1Q9NYA1 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPHK1Q9NYA1 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.98■□□□□ 0.95
SPHK1Q9NYA1 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.98■□□□□ 0.95
SPHK1Q9NYA1 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPHK1Q9NYA1 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SPHK1Q9NYA1 AL354811.1-201ENST00000610286 706 ntBASIC20.98■□□□□ 0.95
SPHK1Q9NYA1 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.98■□□□□ 0.95
SPHK1Q9NYA1 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPHK1Q9NYA1 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.98■□□□□ 0.95
SPHK1Q9NYA1 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPHK1Q9NYA1 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.98■□□□□ 0.95
SPHK1Q9NYA1 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPHK1Q9NYA1 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SPHK1Q9NYA1 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.98■□□□□ 0.95
SPHK1Q9NYA1 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
SPHK1Q9NYA1 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPHK1Q9NYA1 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPHK1Q9NYA1 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SPHK1Q9NYA1 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPHK1Q9NYA1 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
SPHK1Q9NYA1 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.97■□□□□ 0.95
SPHK1Q9NYA1 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.97■□□□□ 0.95
SPHK1Q9NYA1 AC137767.1-201ENST00000602918 1920 ntBASIC20.97■□□□□ 0.95
SPHK1Q9NYA1 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPHK1Q9NYA1 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPHK1Q9NYA1 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SPHK1Q9NYA1 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPHK1Q9NYA1 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPHK1Q9NYA1 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPHK1Q9NYA1 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPHK1Q9NYA1 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.96■□□□□ 0.95
SPHK1Q9NYA1 AC079089.2-201ENST00000531211 1277 ntBASIC20.96■□□□□ 0.95
SPHK1Q9NYA1 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.96■□□□□ 0.95
SPHK1Q9NYA1 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
SPHK1Q9NYA1 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.96■□□□□ 0.95
SPHK1Q9NYA1 AC068473.5-201ENST00000616428 2072 ntBASIC20.96■□□□□ 0.95
SPHK1Q9NYA1 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.96■□□□□ 0.95
SPHK1Q9NYA1 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
SPHK1Q9NYA1 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPHK1Q9NYA1 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPHK1Q9NYA1 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SPHK1Q9NYA1 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.95■□□□□ 0.94
SPHK1Q9NYA1 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SPHK1Q9NYA1 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SPHK1Q9NYA1 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SPHK1Q9NYA1 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.95■□□□□ 0.94
SPHK1Q9NYA1 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.95■□□□□ 0.94
SPHK1Q9NYA1 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SPHK1Q9NYA1 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPHK1Q9NYA1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SPHK1Q9NYA1 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPHK1Q9NYA1 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPHK1Q9NYA1 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPHK1Q9NYA1 AC027612.3-201ENST00000413684 1047 ntBASIC20.94■□□□□ 0.94
SPHK1Q9NYA1 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.94■□□□□ 0.94
SPHK1Q9NYA1 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.94■□□□□ 0.94
SPHK1Q9NYA1 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SPHK1Q9NYA1 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SPHK1Q9NYA1 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.94■□□□□ 0.94
SPHK1Q9NYA1 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPHK1Q9NYA1 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPHK1Q9NYA1 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SPHK1Q9NYA1 LINC00526-201ENST00000581067 1875 ntBASIC20.93■□□□□ 0.94
SPHK1Q9NYA1 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
SPHK1Q9NYA1 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.93■□□□□ 0.94
SPHK1Q9NYA1 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.93■□□□□ 0.94
SPHK1Q9NYA1 AC097381.1-201ENST00000429019 1296 ntBASIC20.93■□□□□ 0.94
SPHK1Q9NYA1 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SPHK1Q9NYA1 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.93■□□□□ 0.94
SPHK1Q9NYA1 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPHK1Q9NYA1 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.93■□□□□ 0.94
SPHK1Q9NYA1 AC087623.3-201ENST00000607047 1098 ntBASIC20.93■□□□□ 0.94
SPHK1Q9NYA1 MIR6821-201ENST00000617625 74 ntBASIC20.93■□□□□ 0.94
SPHK1Q9NYA1 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPHK1Q9NYA1 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SPHK1Q9NYA1 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SPHK1Q9NYA1 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.92■□□□□ 0.94
SPHK1Q9NYA1 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPHK1Q9NYA1 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPHK1Q9NYA1 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.92■□□□□ 0.94
SPHK1Q9NYA1 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.92■□□□□ 0.94
SPHK1Q9NYA1 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPHK1Q9NYA1 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPHK1Q9NYA1 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms