Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.54■□□□□ 0.56
GCM1Q9NP62 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GCM1Q9NP62 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.54■□□□□ 0.56
GCM1Q9NP62 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GCM1Q9NP62 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
GCM1Q9NP62 AC133561.1-201ENST00000568600 2415 ntBASIC18.53■□□□□ 0.56
GCM1Q9NP62 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
GCM1Q9NP62 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GCM1Q9NP62 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.53■□□□□ 0.56
GCM1Q9NP62 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
GCM1Q9NP62 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GCM1Q9NP62 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
GCM1Q9NP62 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
GCM1Q9NP62 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
GCM1Q9NP62 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.53■□□□□ 0.56
GCM1Q9NP62 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.53■□□□□ 0.56
GCM1Q9NP62 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
GCM1Q9NP62 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.53■□□□□ 0.56
GCM1Q9NP62 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
GCM1Q9NP62 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
GCM1Q9NP62 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.53■□□□□ 0.56
GCM1Q9NP62 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GCM1Q9NP62 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GCM1Q9NP62 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
GCM1Q9NP62 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GCM1Q9NP62 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
GCM1Q9NP62 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
GCM1Q9NP62 LINC01960-201ENST00000563759 1884 ntBASIC18.52■□□□□ 0.56
GCM1Q9NP62 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
GCM1Q9NP62 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.52■□□□□ 0.56
GCM1Q9NP62 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.52■□□□□ 0.56
GCM1Q9NP62 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.52■□□□□ 0.56
GCM1Q9NP62 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GCM1Q9NP62 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.52■□□□□ 0.56
GCM1Q9NP62 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.52■□□□□ 0.55
GCM1Q9NP62 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.52■□□□□ 0.55
GCM1Q9NP62 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
GCM1Q9NP62 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
GCM1Q9NP62 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
GCM1Q9NP62 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GCM1Q9NP62 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
GCM1Q9NP62 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
GCM1Q9NP62 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GCM1Q9NP62 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
GCM1Q9NP62 AC105265.2-201ENST00000467189 838 ntBASIC18.51■□□□□ 0.55
GCM1Q9NP62 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GCM1Q9NP62 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GCM1Q9NP62 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GCM1Q9NP62 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
GCM1Q9NP62 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GCM1Q9NP62 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GCM1Q9NP62 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GCM1Q9NP62 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
GCM1Q9NP62 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GCM1Q9NP62 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
GCM1Q9NP62 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GCM1Q9NP62 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.5■□□□□ 0.55
GCM1Q9NP62 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GCM1Q9NP62 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.5■□□□□ 0.55
GCM1Q9NP62 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GCM1Q9NP62 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.5■□□□□ 0.55
GCM1Q9NP62 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.5■□□□□ 0.55
GCM1Q9NP62 IGHV3-19-201ENST00000521488 291 ntBASIC18.5■□□□□ 0.55
GCM1Q9NP62 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
GCM1Q9NP62 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GCM1Q9NP62 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GCM1Q9NP62 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.5■□□□□ 0.55
GCM1Q9NP62 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
GCM1Q9NP62 TSPY26P-201ENST00000476365 1326 ntBASIC18.49■□□□□ 0.55
GCM1Q9NP62 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
GCM1Q9NP62 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.49■□□□□ 0.55
GCM1Q9NP62 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.49■□□□□ 0.55
GCM1Q9NP62 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
GCM1Q9NP62 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GCM1Q9NP62 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.49■□□□□ 0.55
GCM1Q9NP62 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
GCM1Q9NP62 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GCM1Q9NP62 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.49■□□□□ 0.55
GCM1Q9NP62 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.49■□□□□ 0.55
GCM1Q9NP62 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GCM1Q9NP62 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.48■□□□□ 0.55
GCM1Q9NP62 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
GCM1Q9NP62 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.48■□□□□ 0.55
GCM1Q9NP62 AC087239.1-201ENST00000622671 572 ntBASIC18.48■□□□□ 0.55
GCM1Q9NP62 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GCM1Q9NP62 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GCM1Q9NP62 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
GCM1Q9NP62 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GCM1Q9NP62 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.48■□□□□ 0.55
GCM1Q9NP62 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.48■□□□□ 0.55
GCM1Q9NP62 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.48■□□□□ 0.55
GCM1Q9NP62 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.48■□□□□ 0.55
GCM1Q9NP62 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GCM1Q9NP62 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GCM1Q9NP62 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GCM1Q9NP62 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GCM1Q9NP62 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.47■□□□□ 0.55
GCM1Q9NP62 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GCM1Q9NP62 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
GCM1Q9NP62 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms