Protein–RNA interactions for Protein: Q9H1Y3

OPN3, Opsin-3, humanhuman

Predicted RBP Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN3Q9H1Y3 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
OPN3Q9H1Y3 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
OPN3Q9H1Y3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
OPN3Q9H1Y3 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
OPN3Q9H1Y3 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
OPN3Q9H1Y3 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.21■□□□□ 0.67
OPN3Q9H1Y3 TPRG1LP1-201ENST00000598702 760 ntBASIC19.21■□□□□ 0.67
OPN3Q9H1Y3 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
OPN3Q9H1Y3 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
OPN3Q9H1Y3 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
OPN3Q9H1Y3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.21■□□□□ 0.67
OPN3Q9H1Y3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
OPN3Q9H1Y3 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
OPN3Q9H1Y3 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
OPN3Q9H1Y3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
OPN3Q9H1Y3 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
OPN3Q9H1Y3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
OPN3Q9H1Y3 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.2■□□□□ 0.66
OPN3Q9H1Y3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
OPN3Q9H1Y3 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
OPN3Q9H1Y3 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
OPN3Q9H1Y3 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
OPN3Q9H1Y3 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
OPN3Q9H1Y3 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.19■□□□□ 0.66
OPN3Q9H1Y3 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
OPN3Q9H1Y3 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
OPN3Q9H1Y3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.19■□□□□ 0.66
OPN3Q9H1Y3 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
OPN3Q9H1Y3 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
OPN3Q9H1Y3 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
OPN3Q9H1Y3 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
OPN3Q9H1Y3 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
OPN3Q9H1Y3 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
OPN3Q9H1Y3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.18■□□□□ 0.66
OPN3Q9H1Y3 LINC01960-201ENST00000563759 1884 ntBASIC19.18■□□□□ 0.66
OPN3Q9H1Y3 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
OPN3Q9H1Y3 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
OPN3Q9H1Y3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
OPN3Q9H1Y3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
OPN3Q9H1Y3 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
OPN3Q9H1Y3 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.18■□□□□ 0.66
OPN3Q9H1Y3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
OPN3Q9H1Y3 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
OPN3Q9H1Y3 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.17■□□□□ 0.66
OPN3Q9H1Y3 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
OPN3Q9H1Y3 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
OPN3Q9H1Y3 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
OPN3Q9H1Y3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
OPN3Q9H1Y3 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.17■□□□□ 0.66
OPN3Q9H1Y3 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
OPN3Q9H1Y3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
OPN3Q9H1Y3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
OPN3Q9H1Y3 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
OPN3Q9H1Y3 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
OPN3Q9H1Y3 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
OPN3Q9H1Y3 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
OPN3Q9H1Y3 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.17■□□□□ 0.66
OPN3Q9H1Y3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
OPN3Q9H1Y3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
OPN3Q9H1Y3 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
OPN3Q9H1Y3 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
OPN3Q9H1Y3 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
OPN3Q9H1Y3 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.16■□□□□ 0.66
OPN3Q9H1Y3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
OPN3Q9H1Y3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
OPN3Q9H1Y3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
OPN3Q9H1Y3 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
OPN3Q9H1Y3 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.16■□□□□ 0.66
OPN3Q9H1Y3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.16■□□□□ 0.66
OPN3Q9H1Y3 AL137784.2-201ENST00000607332 1000 ntBASIC19.16■□□□□ 0.66
OPN3Q9H1Y3 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
OPN3Q9H1Y3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
OPN3Q9H1Y3 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.16■□□□□ 0.66
OPN3Q9H1Y3 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
OPN3Q9H1Y3 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.16■□□□□ 0.66
OPN3Q9H1Y3 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
OPN3Q9H1Y3 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
OPN3Q9H1Y3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
OPN3Q9H1Y3 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
OPN3Q9H1Y3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
OPN3Q9H1Y3 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
OPN3Q9H1Y3 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
OPN3Q9H1Y3 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
OPN3Q9H1Y3 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
OPN3Q9H1Y3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.15■□□□□ 0.66
OPN3Q9H1Y3 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.15■□□□□ 0.66
OPN3Q9H1Y3 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
OPN3Q9H1Y3 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.15■□□□□ 0.66
OPN3Q9H1Y3 AC092437.1-201ENST00000624794 1048 ntBASIC19.15■□□□□ 0.66
OPN3Q9H1Y3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.15■□□□□ 0.66
OPN3Q9H1Y3 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.15■□□□□ 0.66
OPN3Q9H1Y3 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
OPN3Q9H1Y3 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
OPN3Q9H1Y3 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.14■□□□□ 0.66
OPN3Q9H1Y3 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
OPN3Q9H1Y3 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
OPN3Q9H1Y3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.66
OPN3Q9H1Y3 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
OPN3Q9H1Y3 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
OPN3Q9H1Y3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms