Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
KRTAP4-3Q9BYR4 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC7.43□□□□□ -1.22
KRTAP4-3Q9BYR4 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC7.43□□□□□ -1.22
KRTAP4-3Q9BYR4 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
KRTAP4-3Q9BYR4 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC7.43□□□□□ -1.22
KRTAP4-3Q9BYR4 AC092068.2-201ENST00000590491 1708 ntBASIC7.43□□□□□ -1.22
KRTAP4-3Q9BYR4 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
KRTAP4-3Q9BYR4 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
KRTAP4-3Q9BYR4 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
KRTAP4-3Q9BYR4 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
KRTAP4-3Q9BYR4 DUSP8P5-201ENST00000422884 1815 ntBASIC7.43□□□□□ -1.22
KRTAP4-3Q9BYR4 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
KRTAP4-3Q9BYR4 AC004854.2-201ENST00000608450 1441 ntBASIC7.43□□□□□ -1.22
KRTAP4-3Q9BYR4 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
KRTAP4-3Q9BYR4 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC7.42□□□□□ -1.22
KRTAP4-3Q9BYR4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
KRTAP4-3Q9BYR4 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC7.42□□□□□ -1.22
KRTAP4-3Q9BYR4 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
KRTAP4-3Q9BYR4 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
KRTAP4-3Q9BYR4 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
KRTAP4-3Q9BYR4 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
KRTAP4-3Q9BYR4 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
KRTAP4-3Q9BYR4 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
KRTAP4-3Q9BYR4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC7.42□□□□□ -1.22
KRTAP4-3Q9BYR4 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
KRTAP4-3Q9BYR4 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
KRTAP4-3Q9BYR4 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
KRTAP4-3Q9BYR4 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
KRTAP4-3Q9BYR4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC7.42□□□□□ -1.22
KRTAP4-3Q9BYR4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC7.42□□□□□ -1.22
KRTAP4-3Q9BYR4 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
KRTAP4-3Q9BYR4 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
KRTAP4-3Q9BYR4 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
KRTAP4-3Q9BYR4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
KRTAP4-3Q9BYR4 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
KRTAP4-3Q9BYR4 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
KRTAP4-3Q9BYR4 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC7.42□□□□□ -1.22
KRTAP4-3Q9BYR4 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
KRTAP4-3Q9BYR4 GXYLT1P2-201ENST00000433312 1230 ntBASIC7.42□□□□□ -1.22
KRTAP4-3Q9BYR4 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC7.42□□□□□ -1.22
KRTAP4-3Q9BYR4 DLX3-202ENST00000512495 834 ntTSL 2 BASIC7.42□□□□□ -1.22
KRTAP4-3Q9BYR4 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
KRTAP4-3Q9BYR4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC7.42□□□□□ -1.22
KRTAP4-3Q9BYR4 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC7.42□□□□□ -1.22
KRTAP4-3Q9BYR4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC7.42□□□□□ -1.22
KRTAP4-3Q9BYR4 RARRES2P11-201ENST00000635158 484 ntBASIC7.42□□□□□ -1.22
KRTAP4-3Q9BYR4 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
KRTAP4-3Q9BYR4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC7.42□□□□□ -1.22
KRTAP4-3Q9BYR4 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
KRTAP4-3Q9BYR4 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
KRTAP4-3Q9BYR4 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC7.42□□□□□ -1.22
KRTAP4-3Q9BYR4 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
KRTAP4-3Q9BYR4 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
KRTAP4-3Q9BYR4 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
KRTAP4-3Q9BYR4 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC7.42□□□□□ -1.22
KRTAP4-3Q9BYR4 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
KRTAP4-3Q9BYR4 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
KRTAP4-3Q9BYR4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC7.41□□□□□ -1.22
KRTAP4-3Q9BYR4 USP45-205ENST00000472914 1617 ntTSL 5 BASIC7.41□□□□□ -1.22
KRTAP4-3Q9BYR4 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC7.41□□□□□ -1.22
KRTAP4-3Q9BYR4 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC7.41□□□□□ -1.22
KRTAP4-3Q9BYR4 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
KRTAP4-3Q9BYR4 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC7.41□□□□□ -1.22
KRTAP4-3Q9BYR4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
KRTAP4-3Q9BYR4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
KRTAP4-3Q9BYR4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
KRTAP4-3Q9BYR4 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
KRTAP4-3Q9BYR4 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
KRTAP4-3Q9BYR4 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
KRTAP4-3Q9BYR4 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
KRTAP4-3Q9BYR4 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
KRTAP4-3Q9BYR4 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
KRTAP4-3Q9BYR4 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
KRTAP4-3Q9BYR4 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
KRTAP4-3Q9BYR4 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
KRTAP4-3Q9BYR4 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
KRTAP4-3Q9BYR4 ME3-201ENST00000323418 1068 ntTSL 5 BASIC7.41□□□□□ -1.22
KRTAP4-3Q9BYR4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
KRTAP4-3Q9BYR4 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
KRTAP4-3Q9BYR4 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC7.41□□□□□ -1.22
KRTAP4-3Q9BYR4 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC7.41□□□□□ -1.22
KRTAP4-3Q9BYR4 AC123595.1-201ENST00000440769 1046 ntBASIC7.41□□□□□ -1.22
KRTAP4-3Q9BYR4 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC7.41□□□□□ -1.22
KRTAP4-3Q9BYR4 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC7.41□□□□□ -1.22
KRTAP4-3Q9BYR4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC7.41□□□□□ -1.22
KRTAP4-3Q9BYR4 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC7.41□□□□□ -1.22
KRTAP4-3Q9BYR4 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
KRTAP4-3Q9BYR4 TPRG1LP1-201ENST00000598702 760 ntBASIC7.41□□□□□ -1.22
KRTAP4-3Q9BYR4 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
KRTAP4-3Q9BYR4 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC7.41□□□□□ -1.22
KRTAP4-3Q9BYR4 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC7.41□□□□□ -1.22
KRTAP4-3Q9BYR4 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC7.41□□□□□ -1.22
KRTAP4-3Q9BYR4 C1orf229-201ENST00000623686 2258 ntBASIC7.41□□□□□ -1.22
KRTAP4-3Q9BYR4 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC7.41□□□□□ -1.22
KRTAP4-3Q9BYR4 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC7.41□□□□□ -1.22
KRTAP4-3Q9BYR4 LINC02228-203ENST00000641970 1355 ntBASIC7.41□□□□□ -1.22
KRTAP4-3Q9BYR4 LTK-203ENST00000453182 2412 ntTSL 2 BASIC7.41□□□□□ -1.22
KRTAP4-3Q9BYR4 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
KRTAP4-3Q9BYR4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC7.41□□□□□ -1.22
KRTAP4-3Q9BYR4 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms