Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC26.53■■□□□ 1.84
RPAP1Q9BWH6 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
RPAP1Q9BWH6 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RPAP1Q9BWH6 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RPAP1Q9BWH6 AL117328.2-201ENST00000624617 1940 ntBASIC26.53■■□□□ 1.84
RPAP1Q9BWH6 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC26.53■■□□□ 1.84
RPAP1Q9BWH6 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.53■■□□□ 1.84
RPAP1Q9BWH6 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC26.52■■□□□ 1.84
RPAP1Q9BWH6 AC233723.2-201ENST00000623798 2106 ntBASIC26.52■■□□□ 1.84
RPAP1Q9BWH6 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
RPAP1Q9BWH6 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
RPAP1Q9BWH6 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC26.52■■□□□ 1.84
RPAP1Q9BWH6 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC26.52■■□□□ 1.84
RPAP1Q9BWH6 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
RPAP1Q9BWH6 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RPAP1Q9BWH6 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
RPAP1Q9BWH6 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
RPAP1Q9BWH6 AP005435.1-201ENST00000529293 1178 ntBASIC26.51■■□□□ 1.83
RPAP1Q9BWH6 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC26.51■■□□□ 1.83
RPAP1Q9BWH6 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RPAP1Q9BWH6 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
RPAP1Q9BWH6 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
RPAP1Q9BWH6 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
RPAP1Q9BWH6 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
RPAP1Q9BWH6 COMT-203ENST00000403184 2217 ntTSL 2 BASIC26.5■■□□□ 1.83
RPAP1Q9BWH6 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
RPAP1Q9BWH6 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC26.5■■□□□ 1.83
RPAP1Q9BWH6 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
RPAP1Q9BWH6 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RPAP1Q9BWH6 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RPAP1Q9BWH6 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC26.5■■□□□ 1.83
RPAP1Q9BWH6 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RPAP1Q9BWH6 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
RPAP1Q9BWH6 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RPAP1Q9BWH6 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RPAP1Q9BWH6 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RPAP1Q9BWH6 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RPAP1Q9BWH6 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
RPAP1Q9BWH6 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
RPAP1Q9BWH6 LHPP-203ENST00000392757 840 ntTSL 3 BASIC26.49■■□□□ 1.83
RPAP1Q9BWH6 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC26.49■■□□□ 1.83
RPAP1Q9BWH6 KRT18P14-201ENST00000534205 1250 ntBASIC26.49■■□□□ 1.83
RPAP1Q9BWH6 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC26.49■■□□□ 1.83
RPAP1Q9BWH6 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
RPAP1Q9BWH6 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RPAP1Q9BWH6 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC26.49■■□□□ 1.83
RPAP1Q9BWH6 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
RPAP1Q9BWH6 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RPAP1Q9BWH6 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
RPAP1Q9BWH6 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
RPAP1Q9BWH6 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RPAP1Q9BWH6 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
RPAP1Q9BWH6 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RPAP1Q9BWH6 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
RPAP1Q9BWH6 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RPAP1Q9BWH6 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC26.48■■□□□ 1.83
RPAP1Q9BWH6 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC26.48■■□□□ 1.83
RPAP1Q9BWH6 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
RPAP1Q9BWH6 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
RPAP1Q9BWH6 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC26.48■■□□□ 1.83
RPAP1Q9BWH6 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RPAP1Q9BWH6 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC26.47■■□□□ 1.83
RPAP1Q9BWH6 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
RPAP1Q9BWH6 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC26.47■■□□□ 1.83
RPAP1Q9BWH6 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
RPAP1Q9BWH6 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RPAP1Q9BWH6 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC26.47■■□□□ 1.83
RPAP1Q9BWH6 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC26.47■■□□□ 1.83
RPAP1Q9BWH6 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
RPAP1Q9BWH6 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
RPAP1Q9BWH6 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RPAP1Q9BWH6 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RPAP1Q9BWH6 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
RPAP1Q9BWH6 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC26.46■■□□□ 1.83
RPAP1Q9BWH6 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
RPAP1Q9BWH6 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC26.46■■□□□ 1.83
RPAP1Q9BWH6 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
RPAP1Q9BWH6 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
RPAP1Q9BWH6 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
RPAP1Q9BWH6 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC26.46■■□□□ 1.83
RPAP1Q9BWH6 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
RPAP1Q9BWH6 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
RPAP1Q9BWH6 LINC02228-203ENST00000641970 1355 ntBASIC26.46■■□□□ 1.83
RPAP1Q9BWH6 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC26.46■■□□□ 1.83
RPAP1Q9BWH6 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC26.46■■□□□ 1.83
RPAP1Q9BWH6 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC26.46■■□□□ 1.83
RPAP1Q9BWH6 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC26.46■■□□□ 1.83
RPAP1Q9BWH6 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
RPAP1Q9BWH6 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.83
RPAP1Q9BWH6 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.83
RPAP1Q9BWH6 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.83
RPAP1Q9BWH6 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC26.45■■□□□ 1.83
RPAP1Q9BWH6 TERT-206ENST00000508104 2486 ntTSL 5 BASIC26.45■■□□□ 1.82
RPAP1Q9BWH6 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
RPAP1Q9BWH6 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
RPAP1Q9BWH6 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC26.45■■□□□ 1.82
RPAP1Q9BWH6 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
RPAP1Q9BWH6 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
RPAP1Q9BWH6 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
RPAP1Q9BWH6 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC26.45■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms