Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC31.6■■■□□ 2.65
SCAF11Q99590 RGMA-211ENST00000557420 989 ntTSL 3 BASIC31.6■■■□□ 2.65
SCAF11Q99590 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC31.6■■■□□ 2.65
SCAF11Q99590 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
SCAF11Q99590 SLC29A4P1-201ENST00000398760 971 ntBASIC31.59■■■□□ 2.65
SCAF11Q99590 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
SCAF11Q99590 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
SCAF11Q99590 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
SCAF11Q99590 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
SCAF11Q99590 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
SCAF11Q99590 FAM201B-201ENST00000458407 597 ntBASIC31.59■■■□□ 2.65
SCAF11Q99590 UBE2DNL-204ENST00000602536 740 ntBASIC31.59■■■□□ 2.65
SCAF11Q99590 AC068587.7-201ENST00000641602 218 ntBASIC31.59■■■□□ 2.65
SCAF11Q99590 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
SCAF11Q99590 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
SCAF11Q99590 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC31.58■■■□□ 2.65
SCAF11Q99590 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC31.58■■■□□ 2.65
SCAF11Q99590 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC31.58■■■□□ 2.65
SCAF11Q99590 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
SCAF11Q99590 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
SCAF11Q99590 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC31.58■■■□□ 2.65
SCAF11Q99590 PFKL-212ENST00000628044 129 ntTSL 3 BASIC31.58■■■□□ 2.65
SCAF11Q99590 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
SCAF11Q99590 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
SCAF11Q99590 AC007322.1-201ENST00000426983 750 ntBASIC31.57■■■□□ 2.64
SCAF11Q99590 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC31.57■■■□□ 2.64
SCAF11Q99590 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC31.57■■■□□ 2.64
SCAF11Q99590 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC31.57■■■□□ 2.64
SCAF11Q99590 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC31.56■■■□□ 2.64
SCAF11Q99590 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC31.56■■■□□ 2.64
SCAF11Q99590 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC31.56■■■□□ 2.64
SCAF11Q99590 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC31.56■■■□□ 2.64
SCAF11Q99590 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC31.56■■■□□ 2.64
SCAF11Q99590 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
SCAF11Q99590 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
SCAF11Q99590 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC31.56■■■□□ 2.64
SCAF11Q99590 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC31.56■■■□□ 2.64
SCAF11Q99590 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC31.56■■■□□ 2.64
SCAF11Q99590 EI24-211ENST00000534546 1544 ntTSL 2 BASIC31.55■■■□□ 2.64
SCAF11Q99590 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC31.55■■■□□ 2.64
SCAF11Q99590 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
SCAF11Q99590 AC073210.2-201ENST00000430369 194 ntBASIC31.55■■■□□ 2.64
SCAF11Q99590 AC104187.1-201ENST00000607510 612 ntBASIC31.55■■■□□ 2.64
SCAF11Q99590 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
SCAF11Q99590 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
SCAF11Q99590 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC31.55■■■□□ 2.64
SCAF11Q99590 KRT87P-202ENST00000534226 1464 ntBASIC31.55■■■□□ 2.64
SCAF11Q99590 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
SCAF11Q99590 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC31.54■■■□□ 2.64
SCAF11Q99590 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
SCAF11Q99590 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC31.54■■■□□ 2.64
SCAF11Q99590 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC31.54■■■□□ 2.64
SCAF11Q99590 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC31.54■■■□□ 2.64
SCAF11Q99590 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
SCAF11Q99590 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
SCAF11Q99590 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC31.54■■■□□ 2.64
SCAF11Q99590 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC31.54■■■□□ 2.64
SCAF11Q99590 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
SCAF11Q99590 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
SCAF11Q99590 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC31.53■■■□□ 2.64
SCAF11Q99590 TBCB-214ENST00000629269 413 ntTSL 5 BASIC31.53■■■□□ 2.64
SCAF11Q99590 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC31.53■■■□□ 2.64
SCAF11Q99590 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC31.53■■■□□ 2.64
SCAF11Q99590 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
SCAF11Q99590 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
SCAF11Q99590 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC31.52■■■□□ 2.64
SCAF11Q99590 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
SCAF11Q99590 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
SCAF11Q99590 ABCB10P4-201ENST00000566803 2184 ntBASIC31.52■■■□□ 2.64
SCAF11Q99590 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC31.52■■■□□ 2.64
SCAF11Q99590 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
SCAF11Q99590 PARP1-202ENST00000366792 553 ntTSL 3 BASIC31.52■■■□□ 2.64
SCAF11Q99590 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
SCAF11Q99590 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC31.52■■■□□ 2.64
SCAF11Q99590 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC31.51■■■□□ 2.63
SCAF11Q99590 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC31.51■■■□□ 2.63
SCAF11Q99590 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC31.51■■■□□ 2.63
SCAF11Q99590 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC31.51■■■□□ 2.63
SCAF11Q99590 AC010141.3-201ENST00000456659 717 ntBASIC31.51■■■□□ 2.63
SCAF11Q99590 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC31.51■■■□□ 2.63
SCAF11Q99590 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
SCAF11Q99590 AC079630.1-202ENST00000618127 1840 ntBASIC31.51■■■□□ 2.63
SCAF11Q99590 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
SCAF11Q99590 ITM2C-210ENST00000620962 501 ntBASIC31.5■■■□□ 2.63
SCAF11Q99590 AC087239.1-201ENST00000622671 572 ntBASIC31.5■■■□□ 2.63
SCAF11Q99590 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
SCAF11Q99590 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
SCAF11Q99590 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC31.49■■■□□ 2.63
SCAF11Q99590 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
SCAF11Q99590 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC31.49■■■□□ 2.63
SCAF11Q99590 POU5F1P3-201ENST00000428824 1078 ntBASIC31.49■■■□□ 2.63
SCAF11Q99590 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC31.49■■■□□ 2.63
SCAF11Q99590 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC31.49■■■□□ 2.63
SCAF11Q99590 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC31.49■■■□□ 2.63
SCAF11Q99590 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC31.49■■■□□ 2.63
SCAF11Q99590 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC31.49■■■□□ 2.63
SCAF11Q99590 MYCNOS-205ENST00000641950 531 ntBASIC31.49■■■□□ 2.63
SCAF11Q99590 AC133041.1-202ENST00000642053 222 ntBASIC31.49■■■□□ 2.63
SCAF11Q99590 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
SCAF11Q99590 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms