Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LINC01006Q8NI28 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.06■□□□□ 0.32
LINC01006Q8NI28 NCF1B-203ENST00000435988 1254 ntBASIC17.06■□□□□ 0.32
LINC01006Q8NI28 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.06■□□□□ 0.32
LINC01006Q8NI28 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
LINC01006Q8NI28 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
LINC01006Q8NI28 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.05■□□□□ 0.32
LINC01006Q8NI28 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
LINC01006Q8NI28 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01006Q8NI28 AL355802.2-201ENST00000402069 882 ntBASIC17.05■□□□□ 0.32
LINC01006Q8NI28 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.05■□□□□ 0.32
LINC01006Q8NI28 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01006Q8NI28 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01006Q8NI28 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01006Q8NI28 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.05■□□□□ 0.32
LINC01006Q8NI28 KRT87P-202ENST00000534226 1464 ntBASIC17.05■□□□□ 0.32
LINC01006Q8NI28 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01006Q8NI28 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
LINC01006Q8NI28 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01006Q8NI28 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01006Q8NI28 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC01006Q8NI28 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LINC01006Q8NI28 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC01006Q8NI28 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LINC01006Q8NI28 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LINC01006Q8NI28 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC01006Q8NI28 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LINC01006Q8NI28 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC01006Q8NI28 MIR663A-201ENST00000385250 93 ntBASIC17.04■□□□□ 0.32
LINC01006Q8NI28 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.04■□□□□ 0.32
LINC01006Q8NI28 AC104187.1-201ENST00000607510 612 ntBASIC17.04■□□□□ 0.32
LINC01006Q8NI28 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LINC01006Q8NI28 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
LINC01006Q8NI28 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.04■□□□□ 0.32
LINC01006Q8NI28 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC01006Q8NI28 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC01006Q8NI28 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC01006Q8NI28 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LINC01006Q8NI28 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC01006Q8NI28 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.03■□□□□ 0.32
LINC01006Q8NI28 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC01006Q8NI28 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.03■□□□□ 0.32
LINC01006Q8NI28 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
LINC01006Q8NI28 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LINC01006Q8NI28 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
LINC01006Q8NI28 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
LINC01006Q8NI28 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC01006Q8NI28 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.03■□□□□ 0.32
LINC01006Q8NI28 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC01006Q8NI28 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC01006Q8NI28 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
LINC01006Q8NI28 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC01006Q8NI28 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
LINC01006Q8NI28 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LINC01006Q8NI28 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
LINC01006Q8NI28 GPX1P1-201ENST00000388829 606 ntBASIC17.02■□□□□ 0.32
LINC01006Q8NI28 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.02■□□□□ 0.32
LINC01006Q8NI28 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.02■□□□□ 0.32
LINC01006Q8NI28 MFSD11-216ENST00000590393 1141 ntBASIC17.02■□□□□ 0.32
LINC01006Q8NI28 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.02■□□□□ 0.32
LINC01006Q8NI28 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
LINC01006Q8NI28 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
LINC01006Q8NI28 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LINC01006Q8NI28 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LINC01006Q8NI28 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC17.02■□□□□ 0.31
LINC01006Q8NI28 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC17.01■□□□□ 0.31
LINC01006Q8NI28 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LINC01006Q8NI28 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LINC01006Q8NI28 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LINC01006Q8NI28 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.01■□□□□ 0.31
LINC01006Q8NI28 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
LINC01006Q8NI28 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC17.01■□□□□ 0.31
LINC01006Q8NI28 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LINC01006Q8NI28 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LINC01006Q8NI28 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
LINC01006Q8NI28 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17■□□□□ 0.31
LINC01006Q8NI28 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
LINC01006Q8NI28 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17■□□□□ 0.31
LINC01006Q8NI28 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LINC01006Q8NI28 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
LINC01006Q8NI28 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17■□□□□ 0.31
LINC01006Q8NI28 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17■□□□□ 0.31
LINC01006Q8NI28 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
LINC01006Q8NI28 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17■□□□□ 0.31
LINC01006Q8NI28 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
LINC01006Q8NI28 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
LINC01006Q8NI28 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LINC01006Q8NI28 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LINC01006Q8NI28 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
LINC01006Q8NI28 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LINC01006Q8NI28 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
LINC01006Q8NI28 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LINC01006Q8NI28 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LINC01006Q8NI28 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC16.99■□□□□ 0.31
LINC01006Q8NI28 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.99■□□□□ 0.31
LINC01006Q8NI28 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC16.99■□□□□ 0.31
LINC01006Q8NI28 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.99■□□□□ 0.31
LINC01006Q8NI28 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC16.99■□□□□ 0.31
LINC01006Q8NI28 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.99■□□□□ 0.31
LINC01006Q8NI28 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms