Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.63
CPEB3Q8NE35 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPEB3Q8NE35 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CPEB3Q8NE35 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPEB3Q8NE35 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPEB3Q8NE35 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CPEB3Q8NE35 AL031432.3-201ENST00000607698 485 ntBASIC19.01■□□□□ 0.63
CPEB3Q8NE35 AL355001.2-201ENST00000620617 1191 ntBASIC19.01■□□□□ 0.63
CPEB3Q8NE35 AC068587.7-201ENST00000641602 218 ntBASIC19.01■□□□□ 0.63
CPEB3Q8NE35 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPEB3Q8NE35 AC137767.1-201ENST00000602918 1920 ntBASIC19.01■□□□□ 0.63
CPEB3Q8NE35 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPEB3Q8NE35 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPEB3Q8NE35 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPEB3Q8NE35 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CPEB3Q8NE35 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.01■□□□□ 0.63
CPEB3Q8NE35 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CPEB3Q8NE35 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19■□□□□ 0.63
CPEB3Q8NE35 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
CPEB3Q8NE35 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19■□□□□ 0.63
CPEB3Q8NE35 AL117328.2-201ENST00000624617 1940 ntBASIC19■□□□□ 0.63
CPEB3Q8NE35 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
CPEB3Q8NE35 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19■□□□□ 0.63
CPEB3Q8NE35 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19■□□□□ 0.63
CPEB3Q8NE35 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CPEB3Q8NE35 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19■□□□□ 0.63
CPEB3Q8NE35 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19■□□□□ 0.63
CPEB3Q8NE35 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CPEB3Q8NE35 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
CPEB3Q8NE35 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CPEB3Q8NE35 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CPEB3Q8NE35 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19■□□□□ 0.63
CPEB3Q8NE35 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPEB3Q8NE35 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPEB3Q8NE35 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CPEB3Q8NE35 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.99■□□□□ 0.63
CPEB3Q8NE35 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.99■□□□□ 0.63
CPEB3Q8NE35 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CPEB3Q8NE35 AP001330.3-201ENST00000520123 633 ntBASIC18.99■□□□□ 0.63
CPEB3Q8NE35 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.99■□□□□ 0.63
CPEB3Q8NE35 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.99■□□□□ 0.63
CPEB3Q8NE35 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.99■□□□□ 0.63
CPEB3Q8NE35 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.99■□□□□ 0.63
CPEB3Q8NE35 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CPEB3Q8NE35 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CPEB3Q8NE35 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPEB3Q8NE35 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPEB3Q8NE35 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPEB3Q8NE35 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.99■□□□□ 0.63
CPEB3Q8NE35 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPEB3Q8NE35 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CPEB3Q8NE35 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CPEB3Q8NE35 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CPEB3Q8NE35 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.98■□□□□ 0.63
CPEB3Q8NE35 AC099791.1-201ENST00000416440 715 ntBASIC18.98■□□□□ 0.63
CPEB3Q8NE35 SUDS3P1-201ENST00000505831 966 ntBASIC18.98■□□□□ 0.63
CPEB3Q8NE35 AP005435.1-201ENST00000529293 1178 ntBASIC18.98■□□□□ 0.63
CPEB3Q8NE35 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CPEB3Q8NE35 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CPEB3Q8NE35 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.98■□□□□ 0.63
CPEB3Q8NE35 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPEB3Q8NE35 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CPEB3Q8NE35 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPEB3Q8NE35 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPEB3Q8NE35 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPEB3Q8NE35 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.98■□□□□ 0.63
CPEB3Q8NE35 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.98■□□□□ 0.63
CPEB3Q8NE35 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CPEB3Q8NE35 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CPEB3Q8NE35 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CPEB3Q8NE35 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPEB3Q8NE35 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CPEB3Q8NE35 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPEB3Q8NE35 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPEB3Q8NE35 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.97■□□□□ 0.63
CPEB3Q8NE35 MIR939-201ENST00000401314 82 ntBASIC18.97■□□□□ 0.63
CPEB3Q8NE35 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.97■□□□□ 0.63
CPEB3Q8NE35 AL136967.2-201ENST00000623968 743 ntBASIC18.97■□□□□ 0.63
CPEB3Q8NE35 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPEB3Q8NE35 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPEB3Q8NE35 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPEB3Q8NE35 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CPEB3Q8NE35 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CPEB3Q8NE35 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CPEB3Q8NE35 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CPEB3Q8NE35 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.96■□□□□ 0.63
CPEB3Q8NE35 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CPEB3Q8NE35 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPEB3Q8NE35 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPEB3Q8NE35 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.96■□□□□ 0.63
CPEB3Q8NE35 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CPEB3Q8NE35 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CPEB3Q8NE35 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPEB3Q8NE35 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
CPEB3Q8NE35 AC242852.2-201ENST00000615738 1807 ntBASIC18.96■□□□□ 0.63
CPEB3Q8NE35 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPEB3Q8NE35 AC027682.1-201ENST00000562846 899 ntBASIC18.96■□□□□ 0.63
CPEB3Q8NE35 AF213884.3-201ENST00000563833 479 ntBASIC18.96■□□□□ 0.63
CPEB3Q8NE35 AC126544.1-201ENST00000580842 1059 ntBASIC18.96■□□□□ 0.63
CPEB3Q8NE35 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms