Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TTC39CQ8N584 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC23.15■■□□□ 1.3
TTC39CQ8N584 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TTC39CQ8N584 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
TTC39CQ8N584 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
TTC39CQ8N584 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TTC39CQ8N584 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
TTC39CQ8N584 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC23.15■■□□□ 1.3
TTC39CQ8N584 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.14■■□□□ 1.3
TTC39CQ8N584 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
TTC39CQ8N584 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
TTC39CQ8N584 AC139530.1-201ENST00000575312 1977 ntBASIC23.14■■□□□ 1.3
TTC39CQ8N584 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.14■■□□□ 1.3
TTC39CQ8N584 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
TTC39CQ8N584 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TTC39CQ8N584 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TTC39CQ8N584 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TTC39CQ8N584 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
TTC39CQ8N584 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TTC39CQ8N584 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TTC39CQ8N584 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC23.14■■□□□ 1.29
TTC39CQ8N584 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TTC39CQ8N584 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TTC39CQ8N584 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TTC39CQ8N584 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TTC39CQ8N584 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TTC39CQ8N584 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TTC39CQ8N584 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TTC39CQ8N584 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
TTC39CQ8N584 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TTC39CQ8N584 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.14■■□□□ 1.29
TTC39CQ8N584 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TTC39CQ8N584 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.13■■□□□ 1.29
TTC39CQ8N584 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TTC39CQ8N584 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.13■■□□□ 1.29
TTC39CQ8N584 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC23.13■■□□□ 1.29
TTC39CQ8N584 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TTC39CQ8N584 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TTC39CQ8N584 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TTC39CQ8N584 IRS3P-201ENST00000223076 1006 ntBASIC23.13■■□□□ 1.29
TTC39CQ8N584 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
TTC39CQ8N584 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TTC39CQ8N584 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC23.13■■□□□ 1.29
TTC39CQ8N584 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TTC39CQ8N584 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
TTC39CQ8N584 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
TTC39CQ8N584 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TTC39CQ8N584 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC23.12■■□□□ 1.29
TTC39CQ8N584 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TTC39CQ8N584 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
TTC39CQ8N584 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TTC39CQ8N584 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TTC39CQ8N584 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC23.12■■□□□ 1.29
TTC39CQ8N584 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC23.12■■□□□ 1.29
TTC39CQ8N584 AL034346.1-201ENST00000568244 1277 ntBASIC23.12■■□□□ 1.29
TTC39CQ8N584 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
TTC39CQ8N584 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.12■■□□□ 1.29
TTC39CQ8N584 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TTC39CQ8N584 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
TTC39CQ8N584 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.12■■□□□ 1.29
TTC39CQ8N584 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TTC39CQ8N584 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TTC39CQ8N584 LINC00526-201ENST00000581067 1875 ntBASIC23.11■■□□□ 1.29
TTC39CQ8N584 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TTC39CQ8N584 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TTC39CQ8N584 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TTC39CQ8N584 GUSBP5-202ENST00000510805 1989 ntBASIC23.11■■□□□ 1.29
TTC39CQ8N584 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TTC39CQ8N584 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TTC39CQ8N584 MFF-208ENST00000409616 1247 ntTSL 5 BASIC23.11■■□□□ 1.29
TTC39CQ8N584 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.11■■□□□ 1.29
TTC39CQ8N584 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.11■■□□□ 1.29
TTC39CQ8N584 AL358852.1-201ENST00000623174 1268 ntBASIC23.11■■□□□ 1.29
TTC39CQ8N584 AC105233.4-201ENST00000642045 216 ntBASIC23.11■■□□□ 1.29
TTC39CQ8N584 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TTC39CQ8N584 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC23.11■■□□□ 1.29
TTC39CQ8N584 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC23.1■■□□□ 1.29
TTC39CQ8N584 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.1■■□□□ 1.29
TTC39CQ8N584 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TTC39CQ8N584 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
TTC39CQ8N584 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC23.1■■□□□ 1.29
TTC39CQ8N584 RHOF-204ENST00000537265 699 ntTSL 2 BASIC23.1■■□□□ 1.29
TTC39CQ8N584 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC23.1■■□□□ 1.29
TTC39CQ8N584 AL354811.1-201ENST00000610286 706 ntBASIC23.1■■□□□ 1.29
TTC39CQ8N584 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TTC39CQ8N584 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TTC39CQ8N584 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TTC39CQ8N584 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
TTC39CQ8N584 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
TTC39CQ8N584 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC23.09■■□□□ 1.29
TTC39CQ8N584 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
TTC39CQ8N584 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
TTC39CQ8N584 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
TTC39CQ8N584 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TTC39CQ8N584 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TTC39CQ8N584 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TTC39CQ8N584 SMUG1P1-201ENST00000590640 811 ntBASIC23.09■■□□□ 1.29
TTC39CQ8N584 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TTC39CQ8N584 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TTC39CQ8N584 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms